Gossypium hirsutum (upland cotton): 107925641
Help
Entry
107925641 CDS
T04793
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X2
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107925641
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107925641
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107925641
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107925641
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107925641
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107925641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
107925641
NCBI-ProteinID:
XP_016711841
UniProt:
A0A1U8LB61
LinkDB
All DBs
Position
A01:115132384..115143755
Genome browser
AA seq
1114 aa
AA seq
DB search
MTLMTTPPVDQEDDEMLVPHTDIVEGPQPMEVSQVEPANTNENQQVEEPQSMKFTWTIEN
FSRLNTKKHYSDIFVVGGYKWRILIFPKGNNVDHLSMYLDVADSSALPYGWSRYAQFSLA
VVNQVHHEYSIRKDTQHQFNARESDWGFTPFMPLSDLYDPSKGYIVNDTVVVEAEVVVRK
ILDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPIGSIP
LALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVE
GTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDN
KYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRED
RKYLSPDADTSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDMKR
ALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIVCNVDEKDIAEHLK
VRLKREQEEEDDKRRYKAQAHLYTIIKVARDEDLLEQIGKDIYFDLVDHDKVRSFRIQKQ
TPFNEFKEELAKEFGIPVQYQRYWIWAKRQNHTYRPNRPLTPQEEAQPVGQLRDMSNKAH
NAELKLFLEVGRGPDLRPVPPPDKTREDIMLFFKLYDAEKGELRYVGRLLVKLSGKPIEN
ITKLNQMAGFAPDEEIELYEEIKFEPCVMCEHLDKRCSFRLSQIEDGDIICFQKSLPIAS
EEACQYPDVPSFLEYVHNRQIVHFRSLERPKEDDFCLELSKIHTYDDVVERVAHKIGLDD
PSKIRLTSHNCYSQQPKSQPIKYRGVETLSEMLIHYNQTSDILYYEVLDIPLPELQGLKN
LKVAFHHATKDEVVIHNIRLPKQSTVGDVIDELKTKVELSHPNAELRLLEVFYHKIYKIF
PPSEKIENINDQYWTLRAEEVPEEEKNLGPNNRLIHVYHFNKETAQNQIQVQNFGEPFFL
VIHEGETLAEVKLRIQKKLQVSDEEFSKWKFAFMSLGQPEYLQDSDIVFKRFQRRDVYGA
WEQYLGLEHSDTSPRRTYVNQNRNTFEKPVKIYN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgactttgatgactactccgccggtagatcaagaagacgacgagatgctcgtgccgcat
acggatattgttgaaggacctcagccaatggaagtttctcaagtcgagcctgctaataca
aatgagaatcagcaagtggaggaacctcaatcaatgaaattcacttggacaattgagaat
ttttctaggctgaacaccaagaagcactattcagatatatttgttgttggtggttataaa
tggcggatactaatttttccaaagggaaacaatgtggaccacttgtcaatgtacctagat
gttgcggattcttctgcattgccatatggttggagtagatatgctcaatttagcttggcg
gtggttaatcaagtccatcacgagtattcaataagaaaggacactcaacaccagttcaat
gcaagagagagtgattggggtttcacaccatttatgcctctcagtgatctttatgaccct
agtaaagggtatattgtgaatgatactgttgttgttgaagctgaggttgttgtccgtaag
atattggattattggtcatatgactcaaagaaagagactggttttgttggacttaagaac
caaggagcaacttgttacatgaactcgcttctgcagaccctataccatataccatacttc
agaaaggctgtgtaccacatgccaacaactgaaaatgacatgcctataggaagcattcct
ttggctctgcagagtttattttacaagcttcaatataatgacactagtgttgcaacaaag
gagttgaccaaatcttttggatgggatacatatgattccttcatgcaacatgatgtacaa
gaactcaacagagtcttgtgtgaaaagcttgaagataaaatgaagggaactgttgtagag
gggacaatacagaagttgtttgagggtcaccatatgaattatattgaatgcatcaacgtg
gattacaagtctacaagaaaggaatcattttatgaccttcagcttgacgtcaaaggatgt
cgggatgtttatgcttcttttgataagtatgtggaagttgagcgccttgagggtgacaat
aaatatcatgctgaagaacatggcttacaggatgcgaagaaaggtgtcttatttattgac
tttccccctgttcttcagcttcagctaaagcgttttgagtatgattttatgcgggataca
atggtaaagataaacgaccgctatgaatttcctcttcagcttgaccttgatagagaagat
cggaagtatctatcacctgatgctgatacgagtgttcgcaacctttacactctccacagt
gtcttagttcatagtggaggagtacatggtggacattattatgcttttatcaggccgacc
ctttctgaccaatggtataaatttgatgacgaacgggtaacgaaagaagatatgaagagg
gcattggaagagcagtatggtggtgaggaagagttgccacagacaaatcctggcttcaat
aacacacctttcaaatttacaaaatactcaaatgcatacatgcttgtttatatacgtgaa
agtgataaggacaaaatagtttgcaatgttgatgagaaggacattgctgaacatttgaag
gtaaggttaaagagagaacaggaagaggaggacgataaaaggagatataaagcacaggct
cacctttatactattataaaggttgcaagagacgaagatcttctagaacagattggaaag
gacatatattttgatcttgtggatcatgacaaagttaggagtttccgtattcagaagcag
acacctttcaatgaatttaaggaggaacttgcaaaagagtttggcataccagtgcaatat
caacgttactggatttgggctaagaggcagaaccatacatatcgtccaaatcgaccttta
acccctcaggaggaggctcagcctgttggacagttgagggatatgtcaaataaggctcat
aatgcagaactaaaactgttcttggaagttgggcgtggaccggatttacggcctgttcct
ccacctgacaaaactagggaagatattatgcttttcttcaagctttatgacgctgagaaa
ggagaattacgttatgttggtaggctcttggtaaaactttctggcaagccaatagaaaat
ataaccaagctaaatcaaatggctggctttgctcctgatgaagaaattgaactttatgag
gaaataaagtttgagccttgtgtgatgtgtgagcatcttgataaaagatgttcattccgg
ttaagtcagattgaagatggggatattatatgctttcagaagtctcttccaattgcaagt
gaagaagcatgccaatatccagatgtgccttcatttctggagtacgtgcacaatcgtcag
attgttcattttcgttctctggagagaccaaaggaagatgatttctgtctagagttgtca
aagatacatacttatgatgatgttgtggaaagagtggctcacaaaattggcttggatgat
ccatccaaaatcaggctcacatctcacaactgctactcccaacaacctaagtctcaacct
attaaataccgaggagtagagactctgtcagaaatgttgatccactataatcagacttct
gacattttgtattatgaagttctggatatccctttgccagaattgcaaggtctgaaaaac
ctgaaagttgctttccatcatgctactaaggatgaagtggtaattcataatattagattg
cccaaacagagcactgttggagatgtgattgatgaacttaagactaaggtggagttgtca
catcctaatgcagagcttagattgcttgaagtcttctatcacaagatctacaagatcttt
ccacccagtgaaaagattgagaacataaatgatcagtattggacattgcgtgcagaagag
gtcccagaagaagaaaagaatcttggtcccaataatcgattgattcatgtctaccacttt
aataaagagactgcccagaaccagattcaagtgcaaaattttggtgagccctttttcttg
gtcattcatgaaggtgaaactctagcggaagttaaattgcggatacaaaagaaattgcaa
gtttctgatgaagagttctccaagtggaagtttgcatttatgtcattgggccaaccagag
tatctacaagactctgacattgtcttcaaacgttttcagagaagagatgtttatggggct
tgggagcaataccttggtttagagcattctgatacctctcctagaaggacttatgttaat
cagaaccgtaacacatttgagaaaccagttaaaatatacaactag
DBGET
integrated database retrieval system
