Gossypium hirsutum (upland cotton): 107925697
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Entry
107925697 CDS
T04793
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107925697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107925697
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107925697
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107925697
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107925697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
RTT107_BRCT_5
BRCT_2
PHD
Motif
Other DBs
NCBI-GeneID:
107925697
NCBI-ProteinID:
XP_016711902
UniProt:
A0A1U8LBC3
LinkDB
All DBs
Position
A12:complement(85047958..85053865)
Genome browser
AA seq
1273 aa
AA seq
DB search
MLESDTPSKTFLGVRFCLYGFDPVNEHNVRVKLINGGGVGVGQYSQNCTHVIVNKIVYDD
PVCVAARNDGKTVVTGLWVDHSFDIGMPVDATSIMYRPLRDLNGIPGAKSLIICLTGYQR
QDRDDIMTMVGLMGAQFSKPLVASKVTHLICYKFEGEKYELAKKIKKIKLINHRWLEDCL
RDWELLSEANYSKSGYELEVMEAEAKDSDEEAEETTLKHSGQRSLNRSPHSLKAGMLSSG
ELLSTVEVATSTIPGHSPNPKEVLVMPGKSHLGTSFNDVNDPELNSFQNSGLRNGSSTKL
AQPGNRGSNSTNMDSNLASTSKSPSLSNEMFTAISYSRKTPRNATPPNLSGEVSGNISGS
PQAMKIKDVSGISSSKIQQPEERICASFVRSPRKGSDLCHGEDSAGILPQKRALELSGSS
SKSQKMSYNAKGSIKGSALDTVQLEPTSSVGDQLQINDYPVNETGYPNVLHSSCAGNVTT
KLSTDLFSSKSVTPDDRQNGRDEKSPNMSSRGYRGSTLAGKLDMPNENAYEKSPQMSFKG
LRESTSVSRSNIGDYSLELLQVVGEPGELQNKQQDVQVPSLYRKLGKDNSHSPSKLDVLE
GGNDESVTKSVSNKQRDVQVPSLDGKLGKDNVDSPSNLDVVEGGNDKSVTKPISKKKLAK
KTLGSRPKLSNIANRKGSIYSSKIASDNHSTISMDGDNERAGHKSASELETCPPTINLDA
AKDVEKVTKCQNIGTSKTQFMDDETQAPDEEDDNGSKKVIGVEKSELVEVMHKADMLVEA
EHVRHDPKVAVHASPVASENGTNGTDPGRAVGSKNSEFGEPALKSGGLKKKTNKRKKQLS
GKARMKAVPSNSKNDLAGENTSVEKNVGDKDNEKENFMPHPDDKPSSANASSRVEISGAA
GKGDTVGLKEIARKSVGKSNNRTLKTKEKSQNVDSNMQPVEKVFNRVKIEPTCFILSGYR
QQRKEFQQVIKRLKGKFCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASGRWILKPEFLS
ACNEAGKFLAEEPYEWHKNGLSEDGAINLEAPRKWRQLKERTGHGAFYGLRIIVYGECIA
PPLDTLKRVVKAGDGNILATCPPYTRFLKSGVDFAVVSPGMPRVDIWVQEFLKHEVPCVV
ADYLVEYVCKPGYSLEKHVLYDTHEWAEKSFTNLTTRAEEIVDDLTHESPGNSESNDITC
QVCGSGDREDVMLICGNESGSVGCGIGIHIDCCDPPLDNVPKEDWFCPKCNKSSINNTSS
KRRKKGTSTSKGK
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgctggaatccgatactccctcgaaaacgtttctcggcgttcgtttttgtctttacggc
ttcgatcccgttaacgagcataatgttcgagtaaagctaatcaacggtggcggcgtaggt
gtcggtcagtatagtcagaattgcactcatgtgattgttaataagattgtctacgatgat
cctgtatgtgttgctgctcgaaacgatggcaaaacagttgtcactgggttatgggttgat
catagttttgatattggaatgcctgttgatgctacttcgattatgtacagacctcttagg
gatttaaatggaattcctggtgctaaaagtttaattatatgcttgactggatatcaaagg
caagatcgagatgacattatgacgatggttggcttgatgggtgctcaattttctaagcct
ctggttgcaagcaaagttactcatctaatatgctataaatttgaaggggagaagtacgag
cttgctaagaaaatcaagaagataaagcttatcaaccaccgctggctggaagattgttta
agagattgggagcttctttcagaagctaattacagcaagagtggctatgagttagaggtg
atggaagctgaagctaaagattctgacgaagaggctgaagaaactacattgaagcattct
ggacaaaggagtctgaataggagccctcatagtttgaaagctggaatgctcagttccggc
gagttgctctccacagttgaagtggccacttccactatacccggacattcaccaaatcct
aaagaagttttagtgatgcctggaaaatctcatttaggcacaagcttcaatgatgttaat
gaccctgagctcaattcttttcagaactcaggtctcaggaatggttcatctactaagcta
gctcaaccaggcaacagaggctcaaattctacaaatatggatagtaacttggcatctacc
tctaagagtccctcattatccaatgagatgttcactgctataagttactccaggaaaact
ccaagaaatgctacacctccaaatttatctggggaggtatcaggcaacattagtggctct
cctcaagctatgaaaattaaggatgtatcaggcatttcttcctctaaaatacagcaacca
gaggaaagaatctgtgcttcttttgttagatctccaaggaaaggaagcgatttgtgtcat
ggagaggactctgctggtatattgcctcagaaaagagctttggaactttctggtagtagc
tctaaatcacaaaagatgagttataatgcaaaaggttccataaaaggcagtgcattggat
actgtacagttggagccgacatcctcggtgggagatcagctacagattaatgactaccca
gtgaatgagactggttatccaaatgttttacatagctcatgtgctggcaatgtgactacc
aagttgtcaactgatctcttttcctctaaatctgtaactccagacgacagacagaatggt
agagatgagaagtcacccaatatgtcctctagagggtatagagggtccaccttggcaggc
aagctggatatgccaaatgagaatgcttatgagaagtcaccccaaatgtccttcaagggg
ttaagagagtcaacctcagtaagcagatcaaatattggcgattacagtctagaactatta
caagtggttggagagccaggtgagctgcagaataagcagcaagatgttcaggttccttca
ctttatagaaagctggggaaggataattcccatagcccttctaagttggacgtgcttgaa
ggtggaaatgatgaatcagtgacaaaatcagttagcaataagcagcgagatgttcaggtt
ccttcacttgatggaaagctggggaaggacaatgtcgacagcccttctaacttggatgtg
gttgaaggaggaaatgataagtctgtgacaaaaccaattagcaagaagaagcttgcaaaa
aagaccttgggttctcgaccaaaactaagtaacattgctaacagaaaaggttctatttac
tcaagcaaaattgcttctgataatcattctacaatttccatggatggtgataatgaaaga
gcaggtcataagagtgccagtgagcttgagacatgccctccaactattaacctggatgca
gcaaaggatgttgaaaaagttacaaaatgtcagaatattggtactagtaagactcaattc
atggatgatgaaactcaagctccagatgaggaagatgacaatggttctaagaaggtgatt
ggagtagagaagtctgagttggttgaagtgatgcataaagcagatatgttagtagaggca
gaacatgtcagacatgatcccaaagtggctgtacatgcgagtccagttgcctctgagaat
ggaacaaatggaactgatcctgggagggcagttgggagcaaaaattctgaatttggtgaa
ccagcgttaaagagtggtggcttgaaaaagaaaacaaacaaaaggaagaaacaactttct
ggtaaggccaggatgaaggctgttccttctaattccaaaaatgatttggctggggaaaat
accagtgtcgagaagaatgttggtgacaaagataatgaaaaggagaatttcatgccacat
cctgatgacaaaccaagcagtgctaatgcgtcttcaagagtggaaatctccggggctgct
ggcaagggcgacacagttggtctcaaggagattgctaggaaatcagttggtaaatccaat
aacagaacattgaagactaaggaaaaatctcagaatgttgattctaacatgcaaccagtc
gaaaaggttttcaatagagtgaaaattgagcctacatgttttatattgagtggctacaga
cagcagagaaaagaatttcagcaagtcattaagcgtttgaaaggaaagttttgtagagat
tctcatcagtggtcataccaggcaacacatttcattgcacctgatccaattcgtaggact
gaaaaattctttgctgctgctgcttctggaaggtggattcttaaacccgaatttttaagt
gcttgtaatgaggcaggaaagttcttggcagaggagccttatgaatggcacaaaaatggc
cttagtgaagatggtgcaataaacttagaggctccaaggaagtggcgtcagttaaaggag
agaacaggccatggagcattttatggattgcgcattattgtgtatggagaatgcattgct
cctcctttggatactctgaagcgtgttgtgaaagccggggatggtaacattttagcaact
tgtcccccttacaccagattcctcaaatctggtgttgattttgcagttgttagccctggc
atgccacgtgttgatatctgggttcaagagtttttgaaacacgaggtaccctgtgttgtt
gctgactacctagtggaatacgtctgtaaacccggttactccctggagaaacatgtccta
tacgacactcatgaatgggcagaaaaatcattcactaacttgacaactcgagctgaggaa
atcgtcgatgacttgactcatgaatcaccaggtaactcggagagtaatgatataacatgc
caagtttgcggctctggcgacagagaagatgtcatgctgatctgcggcaatgaaagtggt
tccgtaggttgtggaatcggcattcacatcgattgttgcgatcccccgcttgacaatgtt
ccgaaggaggactggttttgcccgaaatgtaacaaaagcagcataaacaacacgtcttcc
aaaagaagaaaaaagggaacgtcaacgtcaaagggtaagtag
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integrated database retrieval system
