Gossypium hirsutum (upland cotton): 107925874
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Entry
107925874 CDS
T04793
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E
KO
K03250
translation initiation factor 3 subunit E
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ghi03012
]
107925874
03051 Proteasome [BR:
ghi03051
]
107925874
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107925874
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-3
107925874
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
107925874
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107925874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
EIF3E_C
RPN7
TPR_14
TPR_9
TPR_20
TPR_19
Motif
Other DBs
NCBI-GeneID:
107925874
NCBI-ProteinID:
XP_016712099
UniProt:
A0A1U8LG04
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All DBs
Position
D11:complement(70003555..70006818)
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AA seq
437 aa
AA seq
DB search
MATYDLTPRIGPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNMVDYAMDIHKS
LYRTDDVPQDMVERRVEVVARLKALEDAAAPLVTFLQNPNAVQELRADKQYNLQMLNDRY
QIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNW
DIALEELNRLKEIIDSKSFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYL
NAIQTSAPHLLRYLATAFIVNKRRRPQFKEFIKVIQQDQCSYKDPITEFLACVYVNYEFD
GAQKKMKECEEVILNDPFLGKRVEEGNFNTVPLKDEFLENARLFIFETYCRIHQRIDMGV
LFEKLNLNYEEGERWIVNLIRNSKLDAKIDSKTGTVIMEPNRPNVYEQLIDHTKALQGRT
YKLVGQLLEHAQAQPAR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctacttacgatctaaccccacgtatcggcccgaacctagacaggcacttagtgttt
ccattgctggagttcttgcaagagcgacaactatacccagatgaacagatcttgaaagca
aagattgagcttttgaacaagacaaacatggtcgattacgctatggatatccataagagc
ctttaccgcaccgatgatgtccctcaggacatggtcgagaggagagtcgaggtagtcgct
cgtctcaaagctttggaagatgccgccgctcctctcgtcactttcttgcaaaaccctaac
gctgttcaggaattgcgtgctgataaacagtataatctccagatgctcaatgaccgctac
cagattggtccagatcaaatagaggcattgtatcagtatgcaaaattccaatttgagtgt
ggcaactactctggtgctgctgactatttgtatcagtatcgggctttgtgtactaacagc
gaaaggagcttgagtgcattgtgggggaagcttgctgccgagatactgatgcaaaactgg
gatattgctcttgaagaacttaaccgtttgaaagaaataatcgattccaagagcttctca
tcacctttgaaccaagttcagagtagaatatggcttatgcattggagcctcttcatcttt
ttcaaccatgacaatggaagaacacagatcatcgacctatttaatcaagacaagtatcta
aatgccattcaaaccagtgctccccatcttctaaggtacttagccactgcttttattgtc
aacaaaaggagaagacctcaattcaaagaatttatcaaggttatccagcaagatcagtgc
tcttacaaagatcccatcacagagtttttggcatgtgtttatgtcaactatgaatttgac
ggagcacagaagaagatgaaggagtgcgaagaagtgatactgaatgatcctttccttgga
aaaagagttgaagagggcaactttaatactgtcccattaaaagatgagtttcttgagaat
gctcgtctatttatcttcgagacatactgcagaattcatcagcgcattgatatgggggtg
ctttttgagaaactgaatttaaattacgaggagggtgagagatggattgtgaatctcatc
cgaaactcaaaacttgatgcaaagattgattcaaagactggaaccgttattatggaacct
aatcgaccgaatgtttacgagcagctgatcgaccacactaaggcccttcaagggcggacc
tacaagctagtcggccagcttctcgaacatgcacaagcacagcctgcacgttaa
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