Gossypium hirsutum (upland cotton): 107925923
Help
Entry
107925923 CDS
T04793
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00280
Valine, leucine and isoleucine degradation
ghi00650
Butanoate metabolism
ghi01100
Metabolic pathways
ghi04146
Peroxisome
Module
ghi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
107925923
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
107925923
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107925923
Enzymes [BR:
ghi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
107925923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
2HCT
Motif
Other DBs
NCBI-GeneID:
107925923
NCBI-ProteinID:
XP_016712168
UniProt:
A0A1U8LFL0
LinkDB
All DBs
Position
A11:complement(120917253..120924201)
Genome browser
AA seq
378 aa
AA seq
DB search
MIAARRLDKISRLMGSRATPSAFLKAFNKESLLWTESLNPKVRLLGNDDGDAVRFSTYHY
SSNCNHSPTNKVLRNLPAHVKIVEVGPRDGLQNEKEIVPTSTKVQLIKMLVSSGLTVVEA
TSFVSPKWVPQLADAKDVMDAIQNIQGARFPVLTPNLKGFEAAVSAGAKEVAIFASASES
FSKSNINCSIEDSLARFRDVVSAAREISLPVRGYVSCVVGCPVEGIVPPSKVAYVAKQLF
DMGCSEISLGDTIGVGTPGTVIPMLENVMNFVPIDNLAVHFHDTYGQALSNILTSLQMGI
SNVDSSVSGLGGCPYAKGGSGNVATEDVVYMLNGLGIETNVDLEKLLLAGDFICKHLRRP
PSSKTAVALSSKKANSKL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggcaaggcgacttgataagatatcacggctgatgggaagcagagccacccct
tctgcttttctcaaagcttttaataaggagtcattgctttggactgaatctttgaaccct
aaagttaggttacttggtaatgacgatggtgatgctgtccgtttttcaacatatcattac
agctccaattgcaatcatagtcccacaaataaggtcttaagaaaccttccagcacatgtg
aagatagtggaggttgggccaagggatggattgcaaaatgaaaaggaaattgtacctacc
tccacaaaggtccagttaataaaaatgttagtttcttcagggttgactgttgtcgaggcc
acaagttttgtctcaccaaaatgggttccacagctggcagatgcaaaggatgtaatggat
gcaatccagaatattcaaggagcccgatttccagtgctaactccgaaccttaaaggtttc
gaagctgctgtttcagctggagccaaggaagtggccatctttgcctcagcttctgagtct
ttttccaagtcaaacataaattgcagcatcgaagatagtcttgctcgttttagagatgtt
gtttctgctgctagagagatctcacttccagttcgaggatatgtatcatgtgtcgttggc
tgcccagtggaaggaatagtgcctccatcaaaagtagcatatgtggctaaacagctcttt
gatatgggttgctcagaaatttcccttggtgacacaattggtgttggtacacctggtacc
gtcattccaatgctcgaaaatgttatgaattttgtcccaatcgataatcttgctgtccac
tttcatgacacttatgggcaagctctgtctaatatcttaacatcactccaaatggggatc
agtaacgtggattcatcagtttcgggtctcggaggttgtccatatgctaagggtggttcc
ggaaatgttgccaccgaggacgtggtttacatgctcaatggacttggaatagagacaaat
gtcgatctcgaaaaactcttgttggccggagattttatatgcaagcatttgaggcggcca
cctagttcgaagacagcggttgctttgagcagtaagaaggctaactccaagctttaa
DBGET
integrated database retrieval system
