Gossypium hirsutum (upland cotton): 107925932
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Entry
107925932 CDS
T04793
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107925932
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107925932
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GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-GeneID:
107925932
NCBI-ProteinID:
XP_016712178
UniProt:
A0A1U8LFM0
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Position
D11:70749950..70754402
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AA seq
470 aa
AA seq
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MAQQNIQSLVFSYFIVLILFSLFSHYNALKEDLNASCNNYNVEDEMAAGYDPGAYPSYFT
AIEGGGMKLEDPMTVALRDDEVLGMKQRYGVALRWTETVVNVDDFGAYGDKNVDTEAFEK
AWEKACSLNGAVILQVPEGKNYILKPVKFSGPCNSNLTIQILGNIMASDDRSDYNEDSRH
WLLFQKVDNLLVEGHDDGVINGNGMIWWQNSCKINKNLPCKDAPTALTFYNSKNLVVRNL
NIRDAQQIHVSFEKCTNVEASGFKITSPKISPNTDGIHITESKNIRITSSIIGTSDDCIS
IVNGSQNMQAMDITCGPGHGISIGSLGSKNSKAYVSGVTIDGAKLYGTANGVRIKTWQGG
SGTASNIIFQNIEMYNVSNPIIIDQNYCDQSKPCKEQSSTVQVKDVLYNNINGTSSSEFA
INFNCSKNHPCQGIVLQNVNLLQEQEHRPAKAICNNVILREGDNVFPQCP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaaaatatacaatcactagtattctcatatttcatagtactaatcttattc
tctttgttttcacattacaatgctttgaaagaggatttgaatgcttcttgcaataattat
aatgttgaagatgaaatggctgccgggtacgatccgggagcgtacccttcgtattttacg
gccatcgaaggcggcggaatgaagctcgaggatccaatgacggtggcgttaagggacgat
gaagttcttggcatgaagcagagatatggtgtcgctttgaggtggactgaaactgttgtt
aatgttgatgattttggtgcttatggtgataaaaatgttgacactgaggcatttgagaag
gcatgggagaaagcttgctcattgaatggtgcagtaattcttcaagtacccgaaggaaag
aactatattctcaaacctgttaaattttcaggtccctgcaattccaatcttacaatccag
atactggggaacataatggcatcagatgacagatcagattacaatgaagatagtagacac
tggcttttgtttcaaaaggttgataatttgttggttgaaggccatgatgatggggttatt
aatgggaatgggatgatttggtggcaaaattcatgcaaaattaacaaaaatctcccatgc
aaggatgctccaacggctcttaccttctacaatagcaaaaacttggtagttcggaacttg
aacattcgagatgcgcaacaaatacatgtttcctttgaaaaatgcaccaatgttgaagcc
tctggattcaagataacctccccaaaaataagtccaaataccgatgggattcatataaca
gaatcaaaaaacattcggatcacaagctccatcattggaacaagtgatgattgtatctcc
attgtaaacggatctcaaaacatgcaagctatggacataacgtgcggtccaggacacgga
attagcattgggagcttaggatctaaaaattcgaaggcttatgtctctggtgtgactatt
gatggagctaaactatatgggactgcaaatggcgttagaatcaagacatggcagggagga
tcaggaactgcaagcaacatcatatttcaaaacattgaaatgtacaacgtgagtaacccg
atcatcatagaccaaaactactgtgatcaaagcaagccatgcaaggaacagagctcaaca
gttcaagtgaaagacgtgttgtacaacaacattaatgggacaagttcttctgaatttgca
ataaattttaattgcagcaaaaatcatccttgtcaagggattgtgttgcaaaatgtgaac
ttgttgcaggaacaagaacatagaccagctaaagctatttgcaataatgtcatattgagg
gaaggggataatgttttcccacaatgcccttaa
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