Gossypium hirsutum (upland cotton): 107926116
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Entry
107926116 CDS
T04793
Name
(RefSeq) autophagy-related protein 8f
KO
K08341
GABA(A) receptor-associated protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
ghi04145
Phagocytosis
ghi04156
Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
107926116
04136 Autophagy - other
107926116
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
107926116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107926116
04121 Ubiquitin system [BR:
ghi04121
]
107926116
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107926116
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107926116
Ubiquitin system [BR:
ghi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
107926116
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107926116
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
107926116
NCBI-ProteinID:
XP_016712408
UniProt:
A0A1U8LGA3
LinkDB
All DBs
Position
A08:3764421..3766919
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AA seq
117 aa
AA seq
DB search
MAKSSFKIEHDFEKRCAEAARIRVKYPDRIPVIVEKTKGNDIPNIDKKKYLVPADLTVGQ
FVYVIRKRIKLSAEKAIFLFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagtagcttcaagatcgagcatgactttgagaaaaggtgcgctgaggctgca
agaattagggtaaaatacccagatagaattccagtgattgtggagaagactaaaggaaac
gacatccctaacattgacaagaagaaatacttagtaccagctgacttgacagtgggtcag
tttgtctatgtgatccgaaaaagaatcaaattgagtgctgaaaaggctatcttcttattt
gtggacaatgtcctccctccaactggagcaattatgtcaaccatctatgatgaaaagaag
gatgaagatggatttctgtatgttacatacagtggggaaaatacatttggttag
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