Gossypium hirsutum (upland cotton): 107926159
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Entry
107926159 CDS
T04793
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107926159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107926159
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107926159
03012 Translation factors [BR:
ghi03012
]
107926159
04131 Membrane trafficking [BR:
ghi04131
]
107926159
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107926159
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107926159
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107926159
Translation factors [BR:
ghi03012
]
Eukaryotic type
Elongation factors
107926159
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
107926159
Exosome [BR:
ghi04147
]
Exosomal proteins
Proteins found in most exosomes
107926159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
107926159
NCBI-ProteinID:
XP_040967946
LinkDB
All DBs
Position
A05:complement(88189724..88192471)
Genome browser
AA seq
459 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAEREHGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNNNYFFMDATTPKYSKARYDEIVKEVSS
YLKKVGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLQALDQINEPKRPSDKPLRL
PLQDVYKIGGIGTVPVGRVETGILKPGMVVTFGPSGLTTEVKSVEMHHESLPEALPGDNV
GFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHI
AVKFAELVTKIDRRSGKELEKEPKFLENGDAGFVKMVPTKPMVVETFSEYPPLGRFAVRD
MRQTVAVGVIKSVEKKDPSGAKVTVCCQEGWQVNRAGFS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagactcacattaacattgtcgtaattggccatgttgactctggaaag
tcaaccaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtcattgaa
aggtttgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcttgggtgctt
gacaagttgaaggctgagcgtgaacatggtattaccattgatattgccttgtggaagttt
gagaccaccaaatactactgcactgtcattgatgcccctggacatcgtgactttatcaag
aacatgattactggtacctcccaggccgattgtgctgtccttatcattgactctaccact
ggaggttttgaggcaggtatttccaaggatggacagacccgtgagcatgctctgcttgct
ttcactctcggtgtcaagcaaatgatttgctgctgcaacaataattatttttttatggat
gccacaacccccaaatactcaaaggctaggtatgatgaaattgtgaaggaagtgtcttcc
tacttgaagaaggttggttacaaccctgagaagattccttttgtccccatctctggtttt
gagggtgacaacatgattgaaaggtccaccaaccttgattggtacaagggtccaactctt
ctccaggctcttgaccagatcaatgagcccaagagaccctctgacaagccactccgtctt
ccacttcaggatgtgtacaagattggaggtattggaactgtccccgtgggtcgtgttgaa
actggtatcctcaagcctggtatggttgtaacttttggtccctctggattgaccactgaa
gttaagtctgttgagatgcaccacgagtctcttccagaggctcttccaggtgacaatgtt
ggcttcaatgtcaagaatgttgctgtgaaggatctgaagcgaggatatgttgcttcgaac
tcgaaggatgatcctgccaaggaggcagctagtttcacttcccaagtcatcatcatgaac
cacccagggcagattggaaatggatatgcacctgtccttgattgccacacctcccacatt
gcagtcaagtttgcagagctggtgaccaagattgacaggcgttctggtaaggagcttgag
aaggaacccaagttcttggagaatggtgatgcaggatttgttaagatggttcccaccaaa
cccatggttgtggaaaccttctctgagtatcccccactgggtcgttttgctgtgagggac
atgaggcagactgttgctgttggcgttatcaagagcgtggagaagaaagatccatctgga
gccaaggtgacagtctgctgccaagaagggtggcaagtgaaccgtgcgggttttagttga
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