Gossypium hirsutum (upland cotton): 107926281
Help
Entry
107926281 CDS
T04793
Name
(RefSeq) cycloartenol synthase 2
KO
K01853
cycloartenol synthase [EC:
5.4.99.8
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00100
Steroid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107926281
Enzymes [BR:
ghi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.8 cycloartenol synthase
107926281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Pec_lyase
Motif
Other DBs
NCBI-GeneID:
107926281
NCBI-ProteinID:
XP_040931503
UniProt:
A0A1U8LD99
LinkDB
All DBs
Position
A08:complement(1958799..1965634)
Genome browser
AA seq
760 aa
AA seq
DB search
MWKLKIAEGGNPWLRTVNNHVGRQIWEFDPNLGSPEELMEIEKVRLNFTENRFRKKHSSD
LLMRFQFSKENPLPVVLPPVKVKESENVTEEMVTNTLRRAISFHSSVQAHDGHWPGDYGG
PMFLMPGLVITLSITGALNAVLSEEHKKEMSRYLYNHQNEDGGWGLHIEGPSTMFGTALS
YVTLRLLGEGPNDGKGAMERGRDWILNHGGATEITSWGKMWLSVLGAFEWSGNNPLPPEI
WLLPYMLPVHPGRMWCHCRMVYLPMSYLYGKRFVGPITPTVLALRKELYTIPYHEIDWNR
ARNACAKEDLYYPHPLVQDILWASLHKIVEPILMCWPGKKLREKALQTAIEHIHYEDENT
RYICIGPVNKVLNMLCCWVEDPNSEAFKLHLPRLYDYLWVAEDGMKMQGYNGSQLWDTAF
AVQAILSTNLTEEYSSTLRKANMYLRNTQVQEDCPGDLNFWYRHISKGAWPFSTADHGWP
ISDCTAEGLKAVLLLSKIPPEIVGEPLEAKQLYDAVNVILSLQNGDGGFATYELTRSYPW
LELINPAETFGDIVIDYSYVECTSAAIQALVSFRKSHPGHRQEEIDQCIKKATKFIENIQ
APDGSWYGSWGVCFTYGTWFGVKGLVAAGKNFNNSSSIQKACNFLLSKQLPSGGWGESYL
SCQNKVYSNVEGNKPHMVNTGWAMLALIDAGQAERDPTPLHKGAKYLINSQMENGDFPQQ
EIMGVFNRNCMISYSAYRNIFPIWALGEYRTRVLQQWTTS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctgaaaatcgcggaaggagggaatccatggctgagaacagtgaacaatcac
gtcgggagacagatttgggagttcgatcccaaccttggatctcctgaggaattaatggag
atcgagaaagttcgtctcaacttcaccgagaacaggtttcgaaagaagcatagctcagat
ctacttatgcgctttcagttttccaaggagaatccactaccagtggttttacctccggtc
aaagttaaggagtcagaaaatgttacagaagagatggtcaccaatacattacggagagct
ataagttttcattcatctgtccaggcccatgatgggcattggccaggtgattatggaggt
ccaatgtttcttatgcctggcttggttattactctgtctattactggggcactgaatgcg
gtcttatcagaagagcataaaaaggagatgtcacgctatctctataatcatcagaatgaa
gacggcgggtggggcttacacattgagggcccaagtacgatgtttggtactgcattgagt
tatgtgactttaagattgcttggtgaaggacctaatgatgggaagggggcaatggagaga
ggaagagattggattttgaatcatggtggtgctactgaaataacatcatgggggaaaatg
tggctttcagtgcttggagcctttgaatggtctggaaataatcctttgccccctgagata
tggcttcttccttatatgcttccagttcatccaggaaggatgtggtgtcactgccggatg
gtctatttgcctatgtcttatttatatggaaagaggtttgttggccctatcacaccaaca
gttttggctttgaggaaggagctttatactattccataccatgagatagactggaatcga
gcacggaatgcatgtgcaaaggaagatttgtactaccctcacccattggtgcaggatatt
ctttgggcatcccttcacaagatagttgaacctattctgatgtgttggcccggaaagaag
ttgagagaaaaggctctccaaactgcaatagagcacatacactatgaagacgaaaatact
cgttatatctgcattgggcctgtaaacaaggtgttaaacatgctttgctgttgggtggaa
gacccaaattcagaggcgttcaagttgcatcttccaagactttatgattatctatgggtt
gctgaagatggcatgaaaatgcagggttacaatggaagtcaactatgggacactgccttt
gcagttcaagcaattctttcaaccaaccttactgaagagtacagttcaactttgaggaaa
gcaaacatgtacttacggaacacacaggttcaagaagattgccctggggatcttaacttt
tggtaccgtcacatttccaaaggtgcttggcctttttcaactgcagatcatggatggccc
atttcagattgcacagctgagggattaaaagctgttcttttattatcaaaaataccccca
gaaatcgttggagaaccgttggaagcaaaacaattatatgatgctgtaaatgttattctt
tcacttcagaatggagacggtggttttgcaacatatgagctcacaagatcatacccttgg
ttggagctgatcaaccccgcagaaacatttggtgatattgttattgactatagttatgtg
gaatgtacctcagctgcaattcaagctttggtatcttttagaaagtcacaccctgggcat
cgtcaagaggaaatagaccaatgtatcaaaaaggctactaaattcattgaaaatatacaa
gccccagatggttcatggtatggctcgtggggtgtttgcttcacctatggtacatggttt
ggagtgaaaggattggtggctgccggaaagaacttcaataactcgtctagtatccagaag
gcctgcaattttctgctgtccaaacagctcccctcaggtggctggggagaaagttatctt
tcatgtcaaaacaaggtttactcaaatgttgagggcaacaaaccacatatggtaaacact
ggctgggctatgttggctctaattgatgctgggcaggctgagagagatccaacaccactt
cacaaaggagctaaatatttgataaattcccaaatggagaacggtgatttcccgcaacag
gaaattatgggagtgttcaacaggaattgtatgatcagttactctgcgtatcgcaacatt
ttccctatttgggcattaggcgaatatcggactcgagtgttgcagcagtggacaacgtcg
tag
DBGET
integrated database retrieval system
