Gossypium hirsutum (upland cotton): 107926328
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Entry
107926328 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107926328
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107926328
NCBI-ProteinID:
XP_016712649
UniProt:
A0A1U8LHJ8
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Position
A08:complement(2676749..2681424)
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AA seq
594 aa
AA seq
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MATNDYESGLKMLEELTTDAQQIQDQLLGEILSKNAETEYLQGFLHGQTDKQLFKKNVPI
VTYEHLKPYIDRIANGEASSDLLLVEPLIGFSLSSGTSGGLPKLIPTTAESAHITATFNK
LYRSLMIKHFGDINQASKRMELMFAKPDVETPSGLKASAVSTRAFKGSSFKAILPKLYTS
PFETIFCPDTKQSMYCQILFGLIQRDEVVMIGSIFASTVVRSIKFLENNWKELCSNIKTG
QISEWITDSGCRNAASLMLKPNLELADLIEDVCSCKSWEGIIRKLWPKTKYIGTVCTGAM
LQYTAELEFYCGGLPLVSGFYACSEGAVGINLEPLCKPSDVSYTFLPNTVYYEFLSIKED
CVTDSQNQVQLNAMSHHEDTGPVDLVNVKLGQCYEVLVTSSMGLYRYRVGDIIKVTGFHN
NTPQFQFVGRQNVALGVDMERTSEADILKAVAEAKALLDPLGLILTEYTSDGDTSSTPGH
YVIFWEIKPKEGNNNNKNGKELDPKVMEQCCSKMEDSLHFTYRMYRKENMIAALEIRVVK
QGTFESLMEYFVTKGASLSQYKTPICIKSKEALNILDSRVIAKFFSPRTPIQDN
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatgattatgaaagtgggttgaagatgttggaggaactaacaacagatgct
caacaaatccaagaccagttattgggtgaaatactgagtaaaaatgctgaaactgagtat
ttacagggattcctccatggccaaaccgacaagcaactctttaaaaaaaatgtacccatc
gttacttacgaacatctcaagccttatattgatcggatagctaatggggaggcatcatct
gatctacttttagttgaacccctcattgggttctctttaagctctgggacttcgggtggg
ctgccgaagctgatacctaccacggctgaaagtgctcacataacggcgacatttaataag
ttgtaccggtctttgatgataaagcattttggtgacataaaccaagccagtaaaagaatg
gaacttatgtttgccaaaccagatgtcgaaactccttctggactcaaagcaagtgcagtc
tcaacacgagcattcaaggggagtagctttaaagctattttacccaagctttacactagc
ccttttgagactattttttgcccggacaccaaacaaagcatgtactgtcaaatacttttt
ggcttaatacaacgtgatgaggtcgtcatgattggttcaatatttgcatctacggttgta
agaagtatcaagttcttagaaaataactggaaagagctatgctctaatataaaaaccggt
caaataagtgaatggatcactgactcgggttgcagaaatgcagcatcattgatgttgaag
cctaatctagaattggctgacttgatagaagacgtatgtagttgtaaatcatgggaagga
ataatcagaaagctatggcctaaaacaaagtacattggtaccgtatgtacgggtgccatg
ctacaatatactgcagaacttgagttctattgtggtgggctaccattagtgtcaggtttt
tatgcttgctcggaaggtgccgtcgggatcaacttggaacctctatgtaaaccttcagat
gtctcttacacatttctcccaaatacggtttactatgaattcctttcgataaaagaagac
tgtgttacagattctcaaaaccaggttcagttaaacgccatgtctcatcatgaagatacc
ggacctgttgatctcgtaaacgtgaagcttggtcaatgttatgaagtacttgtcacatct
tctatgggattatatcgatatagagtcggagacattattaaggtgaccggttttcacaac
aatacacctcagttccaatttgttgggaggcaaaacgttgctctaggcgtcgatatggaa
agaacaagtgaagcagacatcttaaaggcagtggcagaagcaaaggcacttctcgatccg
cttggactcatcttaacagaatacactagcgacggtgatacatcttctacaccaggtcac
tatgtcatattctgggagattaagccaaaagaaggcaacaacaacaacaagaacggcaaa
gaacttgacccaaaggtaatggaacaatgttgctctaaaatggaagattcattgcatttt
acatatagaatgtataggaaggaaaacatgattgcagctttggagattagggttgttaaa
caaggaacttttgagtcattaatggaatactttgtgaccaaaggagcttctttgagccaa
tacaagacacctatttgcatcaaatctaaagaagctttaaatatattggattcaagagtt
atagccaagtttttcagcccaagaactcctatacaagacaactaa
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