Gossypium hirsutum (upland cotton): 107926374
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Entry
107926374 CDS
T04793
Name
(RefSeq) protein SEMI-ROLLED LEAF 2 isoform X1
KO
K21842
protein EFR3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107926374
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
107926374
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EFR3_ARM
EFR3
Vps39_1
Motif
Other DBs
NCBI-GeneID:
107926374
NCBI-ProteinID:
XP_016712710
UniProt:
A0A1U8LDP6
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Position
A12:complement(75633181..75643418)
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AA seq
1035 aa
AA seq
DB search
MGMISRGVMPVCGSLCFFCPALSTRSRHPVKRYKKFLADIFPRSPDEQPNERMIGKLCEY
ASKNPLRIPKITSALEQKFYKDLRTEQFHSVKVIMLVYKKLIISCKEQMPLFASSFLTII
QVLLDQTRMDDTRVLGCQALSVFVNNQRDGTYMFNLDGLIPKLCLLAQEMGEDGRVHHLR
SAGLQTLSSVVWFMGEFSHVSAEFDNVVSAVLENYRGLETSDDNIHEKQDTQNSSVKDNF
SSTDAITTLSWRSIVTENGEFNVPVEEAENPKFWSRVCLHNMAKLAKEATTVRRVLESLF
RFFDNEELWSIQDGVALSVLQDMQLIIENCGENTHFLLSILIKHLDHKNVLKKPSMQLHI
VHVATSLAQQTKVQPSVAIIGALTDMTRHLRKSIHCSLDDSNLGAEVIEYNQNFRAAVDE
CLVQLSNKVGDAGPVLDMMAVMLENVPNITLMARTLISAVYRTAQIMASVPNLSYQNKAF
PEALFHQLLLAMVNRDHETRVGAHRIFSVVLVPSSVCPCLPSATPSSKRASNLQKTLSRT
VSVFSSSAALFQKLGTEGKEKSVDNKVGNINGISMQDRLSSKKHHSTINENGTVGMDSTK
LQSPSIVNRLKSSYSRAYSIRINQQSNTVEDEKSTISSVEDPALPLRLNSHQITLMLSSL
WAQSISPLNIPENFEAIAHTYSLVLLFARTKNSCNDAMIRSFQLAFSLRSISLEGGPLQP
SRRRSLFILATSMIIFSSKAYNIPPLFPCAKALLTEKTNDPFLRLVDDCKLQTTKDELSP
GKIYGSKEDDEDALKSLSEIHLAENQSKDSLATMIVKFLGKLSDQESSKIRNQLLSNFIP
DDGCPCGTNLFMETPAQTYESGSADNQSPEKVEPPLFTVDDDTIKGQTGAETYLAPETQN
LLSVHELLDALSETAHQVGRQSVSAPPDMPYSEMAGNCEALLVGKQQKMSAVMSAQQNRE
GLVSISTKEGQPRSHAGSGFLKAENPFLDDNIGAVSLNQPAGANLMLCANEHQHQPCFQL
PASIPYDNFLKAAGC
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggggatgatttcgaggggagtgatgcctgtctgcggaagtttgtgctttttttgccca
gccttgagcaccagatctaggcatcccgttaaacgttacaagaaatttctcgccgatatc
tttcctcgatctccggacgaacaacctaatgaacgaatgattggtaaactatgtgaatat
gcttccaagaatcctcttcgtattccaaaaataacaagtgcattggagcagaaattttac
aaggatttgcgaactgaacaatttcattctgtaaaagtcattatgcttgtctacaagaag
ttgattatttcttgtaaggagcaaatgccattatttgcaagtagctttcttaccattata
caagtcctgctagaccaaacaagaatggatgatactcgtgtgctgggatgccaagctctt
tcagttttcgtgaataatcagagggacggtacttatatgttcaacttagatgggttgatt
ccaaaactttgtcttttagctcaagaaatgggtgaggacggcagggttcaccatttgcgt
tctgctggtcttcaaaccctctcgtcagtggtttggttcatgggagagttctctcatgtc
tcagctgaatttgataatgttgtttcagcagtcttggaaaattacagaggtttagaaaca
tcagatgataatatccatgaaaagcaagacacacagaactcctctgttaaagacaatttc
tcttccacagatgccattacaacactttcttggaggagtattgtgactgagaatggagaa
tttaatgtgcctgtggaagaagcagaaaatcccaaattttggtcaagagtttgcctgcat
aatatggccaagttagccaaggaagctacaactgtccgacgtgtcttggaatctttgttt
cgattttttgataatgaggaactgtggtctatccaggatggggtagctctttctgtcttg
caggacatgcagttgataattgaaaactgcggggaaaacacacattttctactgtccatc
ttaataaagcatcttgatcataagaatgttctgaagaagcccagtatgcagctacatatt
gtgcatgttgccacttcccttgctcagcaaacaaaggttcagccttctgtggctataatt
ggtgcattaactgatatgacgagacacctacggaaaagcatacattgctcacttgatgat
tccaatctgggtgctgaggtgattgaatataaccaaaattttcgagcagctgtagatgag
tgccttgttcagttatcaaataaggttggggatgcaggtcctgtacttgatatgatggct
gtgatgctggagaacgtgccaaacattactcttatggccagaaccctgatttctgcagtt
taccgtactgctcaaattatggcatctgttccaaatttgtcataccaaaataaggctttt
cccgaggcattgtttcaccaattacttctagcaatggtcaatagagaccatgaaacaagg
gttggtgctcaccgcatattttctgttgttctggttccttcatctgtttgcccttgtctt
ccttctgctacgccttcttcaaaaagggcctctaatttgcagaagacactctcaagaact
gtatctgtattttcttcttcggctgcactctttcagaagttaggcacggaaggtaaagaa
aaatctgtagacaataaggttggaaacatcaatggtatttccatgcaagacaggttgagt
tctaaaaagcaccattcaaccataaatgaaaatgggactgttggcatggacagtacaaag
ctccaaagccccagcattgtgaacaggttgaaatcaagttacagccgagcttatagtata
aggataaatcaacaatcaaatacagttgaagatgaaaaatcaacaattagttcagttgaa
gatccagctttacctcttcgattaaacagccatcagataactctcatgctttcatctctt
tgggcgcaatccatctctcctttaaatattcctgaaaactttgaagcaattgctcatacc
tacagcctggtgttgctatttgcacgaacaaagaactcctgtaatgatgctatgattcga
agctttcagctagccttttccttaagaagcatatctctagaaggaggaccactgcagcca
tcacgtcggaggtccctctttatccttgctacttctatgatcatcttctcatcgaaagcc
tacaacattcccccacttttcccttgtgctaaagctttgcttacagaaaaaacaaatgat
ccatttctgcggttggtcgatgattgcaagttacagactactaaagatgaattaagtcca
ggcaaaatatatggatcaaaagaagatgacgaagatgctctgaagtcactttcagaaata
catttagcagagaaccaatctaaagattcacttgcaaccatgatagtgaagtttcttgga
aaattgtcggatcaagaatcatccaaaataagaaaccagttacttagcaatttcatccct
gatgatggatgtccatgtggaactaatctgttcatggagacgcctgcacaaacatatgaa
tctggatcagcagataaccaatctcctgaaaaggttgagcctccattattcacagtagat
gatgatacaatcaaaggtcaaacaggtgccgaaacatatttggcacctgaaactcaaaat
ctcctgagtgttcatgaacttcttgatgctctttcagagacagctcatcaagttggaaga
cagtctgtgtcagctccccctgacatgccttatagtgaaatggcagggaactgcgaggca
cttctggtgggaaagcagcagaagatgtctgctgtaatgagtgctcaacagaatcgagaa
ggtttagtgagcatttccacaaaggaggggcaacctcgttcacatgctggttctggtttt
ttgaaggctgaaaatccatttcttgacgataacattggtgctgtctctttaaatcaacct
gctggcgctaatctgatgctttgtgcaaacgagcaccaacatcagccctgctttcagctt
cctgcctcaatcccatatgacaatttcctgaaggctgctggttgctga
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integrated database retrieval system
