Gossypium hirsutum (upland cotton): 107926494
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Entry
107926494 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
ghi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107926494
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107926494
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107926494
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107926494
03036 Chromosome and associated proteins [BR:
ghi03036
]
107926494
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107926494
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107926494
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107926494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
107926494
NCBI-ProteinID:
XP_016712844
UniProt:
A0A1U8LI47
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All DBs
Position
A07:complement(97960619..97964610)
Genome browser
AA seq
516 aa
AA seq
DB search
MMIKQIFNRLPRKQSKSSDNREGGGTSASSSNAYTSSRNNANSGGPASSGVSSTPNLGLN
QGNKVSQVVNTKLNGDVLASSFETLPSFKDIPNSEKQNLFIQKLNLCRVVFDFSDPTKNL
KEKDIKRQTLLELVDYVSSANGKFPEIVMQEFVKTVSLNLFRPLTSPPRENKVLEAFDVE
DEEPSVDPAWSHLQVVYELFLRFVVSPETDAKLAKRYIDHTFILKLLDLFDSEDPRERDS
LKTLLHRIYGKFMVHRPFIRKAINNIFYRFIFETGKHNGIAELLEILGSIINGFALPLKE
EHKLFLVRVLIPLHKPKCIPAYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSSKE
VMFLGELEEVLEATQSVEFHRCMVPLFHQIGRCLSSSHFQVAERALFLWNNHHIETLIKQ
NRNVILPIIFPSLERNARSHWNPAVQSLTLNVQKIFSDNDPELFEECLHMFQEEEARENE
AKSKREATWKRLEEIAAMKAASNQPVLISLKVTTRK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaaacaaatatttaataggcttccacggaaacaatctaagtcaagtgacaat
cgtgagggaggtggaacctctgcctcttcttcaaatgcttataccagttcaagaaataat
gcaaattctggcggtccagcctcttctggtgttagttctacgccaaatttagggctgaat
caagggaataaggtttctcaagtggtgaatacaaagctgaatggagatgtattggcctct
tcatttgagacattgcctagttttaaagatattccgaattccgagaagcagaacttgttt
atccagaagctgaacctgtgtcgtgtcgtgtttgacttcagtgacccaacaaaaaacctc
aaagaaaaggatatcaagcgacaaactttgctagagcttgtagattatgtttcatctgct
aatgggaaattcccagagattgttatgcaggaattcgtgaagacggtgtctctgaatttg
tttagaccacttacttcacctccacgtgagaacaaggttttagaagcatttgatgtggaa
gatgaggagccatcggttgaccctgcatggtctcatttgcaagttgtctatgagttattc
ttgaggtttgtggtgtcacccgagacagatgcaaaactggccaagcggtatatagatcac
actttcattctaaagttactagatctttttgattccgaggaccccagagaaagggactct
ttgaaaactcttctgcaccgaatttatgggaagttcatggtccatcgtccattcatccgg
aaagcaatcaacaacatcttttaccgttttatttttgaaaccggaaaacacaatggaata
gctgagctattagaaatactgggaagtataatcaatgggtttgctttaccactgaaggag
gaacataagctctttcttgttcgtgtactgataccacttcacaaaccgaagtgcatacct
gcttaccaccagcagttatcttactgcattactcaatttgtcgagaaagactgcaagctt
gctgacactgttatacggggcttgctgaagtactggccggttaccaatagctcaaaagaa
gtcatgttcttgggtgaacttgaggaagttttggaagcaacacaatctgtggagtttcat
cgttgcatggtacccttattccatcagattggccgctgcttaagtagttcgcattttcag
gtggccgagagggcattgttcttatggaacaatcatcatatcgaaaccctaataaagcag
aaccgtaatgttatacttccgattatctttccttccttggaaaggaatgcaagaagccac
tggaatcctgcagtgcagagcttgacactaaacgtccaaaagattttctctgacaatgac
cccgagctctttgaggagtgcttgcatatgtttcaggaagaagaagcacgagaaaatgag
gctaaatcaaaacgggaagccacatggaaacggttagaagagattgcagcaatgaaagct
gccagtaatcaaccagtgctcatttccctgaaagtaactactcgcaagtga
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