Gossypium hirsutum (upland cotton): 107926825
Help
Entry
107926825 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-9-like
KO
K10357
myosin V
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107926825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107926825
04131 Membrane trafficking [BR:
ghi04131
]
107926825
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107926825
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107926825
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107926825
mRNA cycle factors
P-body specific factors
107926825
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Myosins
107926825
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107926825
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107926825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
DUF7121
nSTAND3
EzrA
AAA_16
AAA_22
DUF1664
CbiA
ABC_tran
Flp1_like
Motif
Other DBs
NCBI-GeneID:
107926825
NCBI-ProteinID:
XP_016713246
UniProt:
A0A1U8LF63
LinkDB
All DBs
Position
D11:58015399..58025813
Genome browser
AA seq
1527 aa
AA seq
DB search
MATVNITVGSHVWVEDPDESWIDGVVSKITGKDVAINTTNGKTVTEKLSKIYPKDLEAPP
GGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQKLPHIYDSHMMQQYK
GAPFGELSPHVFAVADVAYRAMINERKSNSILVSGESGAGKTETTKMLMRYLAFLGGRVA
TEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLER
SRVCQVSDPERNYHCFYLLCAAPQEEVDKYKLGNPKSFHYLNQSRCYELVGVSDAQDYLA
TRRAMDIVGISDKEQEAIFRVVAAILHLGNICFTKGKEVDSSVPKDDQAKFHLKTTAELL
MCDVNALEDALCKRVMVTPEEVIKRSLDPQSATISRDGLAKTLYSRLFDWLVDKINKSIG
QDPNSKFLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEKINW
SYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLS
RTDFTIAHYAGDVLYQSDQFLDKNKDYVVPEHQDLLSASKCSFVSGLFPPLPEETSKSSK
FSSIGSRFKLQLQSLMDTLNSTEPHYIRCVKPNNQLKPAIFENVNIMQQLRCGGVLEAIR
ISMAGYPTRKPFFEFINRFGLLHPEALEGNYDEKVACQKILEKAGLQGYQIGLTKIFLRA
GQMAELDTRRAEVLNTAAKTIQRRIRTHISRKRFLAIQKASINLQAICRGRLACKVYSNK
REQAAALKIQKNIRRHQSRQAYKKLHVSALVLQTGMRAMAAHNELRFRKLNKAATLVQAR
WRCRRAATYYKKXQRGCIVTQTRWRGRVARRELRKLKMAARETGALKEAKDKLEKNVEEL
TWRLQLEKRLRTDLEEAKAQEVAKLQNTLQEMQKTIDETNELLEKERESAKKAIEEAPPV
VQEKEVLVEDTKQIESLTEELETLKTSLESEKQRADSAEEKYNELKESSEETGKKLDETE
KKLKQLQDTLRGLEEKLTNLESENKVLRQQAVSMTPNKFLSGRSRSILQRGSESGHLEPR
VPIDLHSSSINHREPHEVEEKPQKSLNEKQQENQDLLIRCIAQHLGFAGNRPIAACIIYK
CLLQWRSFEVERTSVFDRIIQTIGNAIETQDNNDVLAYWLSNASTLLLLLQCTLKASGAA
GMTPQRRRSSSATLFGRMTQSFRGAPQGVSLALINGGVTAGVDTLRQVEAKYPALLFKQQ
LTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGASRSVANTAGQQALIAHWQ
GIVKSLGNFLNTLKLNFVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAG
LAELEHWCYEATDEYAGLAWDELKHIRQAIGFLVIHQKSKKTLDEISHDLCPVLSIQQLY
RISTMYWDDKYGTHSVSPDVIANMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLSKSME
QIDIADIEPPPLIRENIGFSFLLPRSD
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggtaaatattactgtagggtctcacgtgtgggttgaagacccagatgaatct
tggattgatggggtggtttcgaaaattactggaaaagatgttgcgattaacaccactaat
ggaaaaacggtcactgaaaaattatcaaaaatatatccaaaagacttggaagctccacct
ggtggagttgatgacatgaccaagctatcttatctacatgagcctggagttttgcagaat
ttgaaagctagatatgaactcaatgaaatttatacttatacaggaaatatattaattgct
attaatccattccaaaaactgcctcacatctatgattctcatatgatgcaacaatacaag
ggagccccatttggggagctaagtcctcatgtttttgcagttgctgatgttgcatacagg
gccatgattaatgaaaggaaaagcaattcaattctggttagtggtgaaagtggagcaggt
aaaactgagaccacgaagatgcttatgcgataccttgcctttcttggtggtcgagttgcc
accgaaggacggacagtagaacaacaagttcttgaatctaatccagttcttgaagcattt
ggcaatgctaaaactgttcgaaataataactccagtcgtttcggtaaatttgttgagatc
cagtttgataagcatggaagaatatcaggagctgctatcagaacttaccttctagagaga
tctcgggtttgccaagtttctgaccctgagcgcaactaccactgtttttatcttctttgt
gcggcaccacaggaggaagttgataagtataagttgggaaaccccaaaagctttcactat
cttaaccagtcacgctgctatgaactggttggtgtaagtgatgcccaagattatcttgcg
acacggagagctatggatattgtcggaattagtgacaaggagcaggaagccattttcaga
gttgttgctgcaattctccatcttggaaacatttgtttcactaaaggaaaggaagttgat
tcatcagttccgaaagatgaccaggctaagttccatctgaagacaacagcagagcttctc
atgtgtgatgttaatgccttagaagatgcattgtgtaagcgtgttatggtcacacctgag
gaagttataaagagaagtctcgatcctcaaagcgctacaattagcagggatggcttggct
aaaacactttattcacgattgtttgactggctggtagataaaattaataagtcaattgga
caagatccaaactcgaaatttttaataggagtcctcgacatctacggcttcgaaagcttt
aagactaatagctttgagcagttttgtattaacttcaccaatgagaagttgcaacagcat
ttcaatcagcatgtatttaagatggagcaagaagagtacacaaaagagaagatcaattgg
agctacattgaatttgttgataaccaggatgtcctcgaccttattgaaaagaaacctgga
ggaattgttgctcttctagacgaagcttgcatgttcccgaaatcaactcatgaaactttt
gcaaacaagctttatcagacgtttaagaaccacaagagattcattaagccgaaattgtct
cgcactgatttcaccattgctcattatgctggagatgttctataccaatcagatcaattt
ttggacaaaaacaaggattatgtggttcctgaacatcaagacttgttgagtgcttccaaa
tgttcgtttgtatcaggtcttttccctccacttccagaagaaacatctaaatcatccaag
ttttcttcaattggttctcgttttaagctccaactacagtctctaatggacacattaaat
tctacggaacctcactacatccgatgtgtaaagccgaacaaccaacttaaacctgctata
tttgagaatgttaatatcatgcaacaactccgttgtggtggtgttctagaggcaatcaga
atcagtatggccggatatccaactcggaaacctttctttgaattcattaaccgattcggg
ctgcttcatcctgaggctttggaaggaaactatgatgaaaaggttgcttgccagaagatt
ctggaaaaggccggtcttcaagggtatcaaataggcctaacaaagatctttctgagagct
ggtcagatggcagaattagatacaaggagagcagaagtactcaatactgctgccaaaact
atacagcggcggattcgtacccatatatctcgtaaaagattccttgcaatacaaaaggca
tctattaatcttcaggccatatgtagaggaagattggcttgcaaagtttatagtaacaag
agagagcaggcagcagctttgaaaattcagaagaacataaggaggcaccaatctagacaa
gcctataagaagcttcatgtatcagcccttgtcttacagacaggcatgagggcaatggct
gctcataatgaattgagattcaggaagttaaataaagcggctacattggttcaggctcga
tggcgttgtcgcagagctgctacatattataagaagnctcaaagaggatgtatagtgaca
caaaccaggtggaggggaagagttgcaagaagagagcttagaaagctcaaaatggctgca
agggaaacaggtgcactaaaagaagcgaaggataagcttgaaaagaatgtggaggaactt
acttggcgtttacagcttgagaaacgtttaaggactgatctagaagaagcaaaagctcag
gaggtagcaaaactgcaaaacacattgcaagaaatgcagaaaacaattgatgaaaccaat
gaattgcttgaaaaagaacgagagtctgcaaagaaagccatcgaagaagcgcctcctgtt
gtacaagagaaagaagttttagttgaagatacaaagcaaattgaatctctaacagaagaa
ttggaaaccctaaagacctcattagaatcggaaaaacaaagagcagacagtgctgaagaa
aaatacaatgaactcaaagagtcaagtgaagaaactggaaaaaaactggacgaaacagaa
aaaaaacttaaacaactccaggacacattgagagggttagaggagaagctcactaatcta
gaatcggagaataaagtactacggcaacaggctgtatctatgactccaaataagttcctt
tctggacgctcgagatcgattttgcagagaggttctgaaagtgggcatctagaaccaagg
gtacccattgatcttcacagcagctcaataaaccatagagagccacacgaagtggaggag
aaaccgcaaaaatcactaaatgagaaacaacaggaaaaccaggatttgctcattcgatgt
attgcgcaacatttaggctttgcagggaacaggcctattgcagcttgtatcatttacaaa
tgtcttctgcaatggagatcgttcgaagttgagcgaactagtgtctttgatcggatcatt
cagactataggcaatgctattgagacccaggataacaatgatgtcttggcctattggcta
tccaatgcctccacacttctcttgctactccaatgcacattaaaagctagtggtgctgct
ggaatgactccacaacgccgtcgatcatcatcagctactttgtttgggagaatgactcaa
agtttccgtggagctccacaaggtgtcagtcttgccttaattaatggaggcgtcaccgct
ggggtggacacgttacggcaagttgaagccaagtacccagccttgctttttaagcaacag
cttacagcatatgtggagaagatatatggaatgatcagagataatctgaagaaagaaatt
tcaccattgcttggattgtgcatacaggcaccaagaacatccagagcaagcttggttaaa
ggagcatcgcgatccgttgcaaatactgcaggccaacaggctttgattgctcactggcaa
gggattgtgaagagccttggaaatttcttgaacacgttgaaactaaattttgtacctcca
ttcttagtccgtaaggtgtttacacagatattctcattcatcaatgttcaactattcaac
agtcttttgttgaggagagagtgttgttcattcagtaatggtgaatatgttaaagctggg
ttagctgaacttgaacactggtgttatgaggcaaccgatgagtatgcaggtttagcttgg
gatgagctcaagcatatacggcaggccatcggttttctagtaatacatcaaaaatctaag
aaaacactggatgaaataagccacgatctttgtccggtcctcagtatacagcagctgtat
cgtattagtacgatgtattgggatgacaagtatggcacgcatagtgtgtccccggatgta
atagccaatatgagagtgttgatgacagaagattccaacaatgcagttagtaattccttc
ctgctggatgatgattcaagcattccattttcagttgacgacctatcaaagtcgatggaa
caaatagacattgcggacatcgaaccaccaccacttattcgcgagaacataggctttagt
ttcttgttgccacgttcagattaa
DBGET
integrated database retrieval system
