Gossypium hirsutum (upland cotton): 107926893
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Entry
107926893 CDS
T04793
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107926893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107926893
Spliceosome [BR:
ghi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
107926893
Complex B
107926893
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_YTH1
DUF4523
xRRM
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
107926893
NCBI-ProteinID:
XP_016713359
UniProt:
A0A1U8LJK6
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All DBs
Position
A08:complement(17070303..17072982)
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AA seq
243 aa
AA seq
DB search
MAEISQDEEIPPNMTLYINNLNEKIKIDQLKKSLHAVFSQFGKILDVLAFKTLKHKGQAW
VIFEDVTSATNALGRMQGFPFYDKEMRIQYAKTKSDIIAKADGSFVPREKRKRHDEKGGK
KRKEQLDPNQAAAGLNPSYAGAYGATPPLSQIPYLGARPIVPEAPAPPNNILFVQNLPHD
ATAMMLQMLFNQYPGLKDVRMVEAKPGIAFVEYENEMQSTVAMQALQGFKIQQNQMLITY
AKK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcggagattagtcaggatgaagaaattcctcccaatatgacattatacattaacaat
ctcaacgagaagatcaaaatcgaccagttgaagaaatcgttgcacgctgtcttttcacaa
tttgggaagatattggatgtgttagcatttaaaactctgaaacataaaggtcaagcttgg
gttattttcgaggatgttacctccgctaccaatgctcttgggcgaatgcagggctttcct
ttttacgacaaggaaatgagaatacaatatgcaaagactaaatctgacataatagcaaaa
gcagatggctcttttgtcccccgagagaagcgaaagaggcatgacgaaaagggagggaaa
aaacggaaagaacaacttgatcctaatcaagctgcagcaggtttgaatccatcttatgcg
ggtgcttacggtgcaacacctcctctatcacaaataccctacctgggtgctagacctata
gttccagaagcacctgcaccaccaaataacattctatttgttcagaatcttcctcatgat
gcaaccgcgatgatgctgcaaatgctcttcaaccagtaccctggtttgaaggacgttcga
atggtggaagcaaaaccaggtattgcctttgtggagtatgaaaacgagatgcaatcaacg
gttgcaatgcaggcactacaaggtttcaagatacagcaaaaccagatgctgattacttat
gcaaagaagtag
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