Gossypium hirsutum (upland cotton): 107927087
Help
Entry
107927087 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107927087
04121 Ubiquitin system [BR:
ghi04121
]
107927087
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107927087
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107927087
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107927087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
Zf_IFT144_1st
zf-RING_UBOX
zf-HC5HC2H
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
107927087
NCBI-ProteinID:
XP_016713543
UniProt:
A0A1U8LG58
LinkDB
All DBs
Position
D03:complement(51069843..51071948)
Genome browser
AA seq
358 aa
AA seq
DB search
MAARYWCYQCSQVVTPIMEAEIKCPFCRGGFIEEMSNGTRDSAPGMDSHIQSDRALSLWA
PILLGMLGNPRRRRRLRRIEFEEEDAENSDGEARHGGDTDLDRELESIIRNRRRNSASIV
QLLQGVRERMASEGENSENDRDRDGVIFINPFNQTIIVQGSYDSNPGGRNRNSDRIGSIG
DYFIGPGLDILLQHLAVAQNDPERYGTPPAQVEAIMALPTVKIEENLKCCVCMDDFEAGS
EAREMPCKHKFHSGCILPWLEIHSSCPVCRYQIPAVGQKLNSERPGNNSNRRESESNVHG
RGSGEEEGEGDGRSGRRFSFPWPFNGLFTSGSQSGRGNSSSSTASSSQSGNASQTNEN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaggtactggtgttatcagtgttctcaagtggttactcccatcatggaagct
gagattaaatgcccattttgtcgaggtgggtttattgaagaaatgagcaatggtacaaga
gacagtgctccaggcatggattcccatatccaatctgatcgagcactctcactatgggct
cccatcttgttaggtatgctgggtaatcctcgtcgccgcagaagacttagacgtatcgag
tttgaagaagaggatgctgagaattctgatggcgaagctcgccatggaggcgatactgac
ttggaccgagaacttgaatccatcattaggaatagaagaaggaactctgcatcgatcgtg
cagctgcttcaaggtgttagagagagaatggcatctgaaggcgagaattctgagaatgat
agggatagggacggagtaattttcatcaatcctttcaatcagactatcattgtccagggc
tcttatgattccaatccgggtggtcgaaaccgaaactccgaccgcataggttctataggt
gattatttcatcggtcctggtttagatatattgttgcagcatttggcagtggcacaaaac
gaccccgaaagatatggaacaccaccagcacaagtagaggcaatcatggccttgccaact
gtgaaaattgaggagaatttgaaatgttgtgtgtgtatggacgatttcgaggctggtagt
gaagcaagggaaatgccatgtaagcataagtttcatagtgggtgtatattgccatggttg
gagatccatagttcttgtccagtttgcagatatcaaatacctgctgttggacagaaactc
aattcagagaggcctgggaataatagcaacagaagagaaagtgaaagtaatgttcacgga
cgtggtagtggggaagaagagggtgaaggggatgggagaagtgggagaaggttttcattt
ccatggccattcaatggcttgttcacatcaggatcacagtccggcagagggaattcatct
tcctcgacagcttcaagctctcaatccggaaatgcttctcaaacaaatgagaactga
DBGET
integrated database retrieval system
