Gossypium hirsutum (upland cotton): 107927094
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Entry
107927094 CDS
T04793
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107927094
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
107927094
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_15
AAA_28
AAA_14
RsgA_GTPase
AAA_22
AAA_18
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
107927094
NCBI-ProteinID:
XP_016713556
UniProt:
A0A1U8LJD9
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Position
D03:complement(49692301..49704141)
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AA seq
597 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAASSKAAAAATAENGVDNASDKVSMLQISDRTCTG
VLCSHPLSRDIRIESLSVTFHGHDLIVDSTLELNYGRRYGLLGLNGCGKSTLLTAIGLRE
LPIPEHMDIYHLTREIEASDMSALQAVISCDEERLKLEKEAEILAAQDDGGGETLERIYE
RLDALDASTAEKRAAEILFGLGFNKMMQAKKTRDFSGGWRMRIALARALFMNPTILLLDE
PTNHLDLEACVWLEENLKRFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYV
QTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEK
VVRDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPENLIYKNLDFGVDLDSRIALVGPNGAG
KSTLLKLMTGELTPIDGMVRRHNHLRIAQFHQHLAEKLDMEMSALQYMIREYPGNEEEKM
RGAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAFRQPHLLLLDEPTNHLDIETIDSLA
EALNEWDGGLVLVSHDFRLINQVAEEIWVCENQAATRWEGDIMDFKQHLKSKAGLSD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgacgcaagcaagaagaaggctgctcagaagaaggctgctgccgctgcaaag
agaggagggaaggccgctgcatcttccaaggcggcagctgcagcgaccgcggagaacggc
gttgataatgcttctgataaagttagcatgctccagatatccgatcggacctgtactggt
gttctctgctcgcatcctctttccagagatattcgtatagagtccttatcagttactttc
cacggacatgatcttattgttgattcaacattggagcttaattatggcagacgctatggt
ttgctaggattaaatggttgtgggaaatccacgctgcttactgcaatagggttgcgtgaa
cttccaattccagagcacatggatatctatcacctgacgagggagattgaagcttcagat
atgtctgcattgcaggctgtcataagttgtgatgaagagaggttgaagttggagaaagaa
gcagaaatcttggcagcacaggatgatggtggtggagagacacttgaacgtatctatgag
cgattggatgccttggatgcatcaactgctgagaaacgtgctgctgaaattttatttggc
ctcggtttcaacaagatgatgcaggcaaagaaaacccgagatttctctggtggttggaga
atgaggattgcattggcacgggctctattcatgaatcccaccattcttttgcttgatgag
ccaaccaatcatttagatttagaagcttgtgtctggttggaagaaaatttgaagagattt
gatcgtatccttgttgtggtatcacattcccaggatttcctgaacggagtttgtacgaac
attatccatatgcaaaacaaaaaacttaagttgtacactggcaattacgatcagtatgtt
caaactcgttctgaattggaagagaaccagatgaaacaatacaagtgggagcaggaacag
attgcttcaatgaaggagtacattgctcgcttcggtcacgggtcagccaaactagcccgg
caggcacagagtaaggagaagacattggcaaagatggagcgaggtggactcacggagaag
gtagtcagggacaaggttctggtgtttcgatttgttgatgtcggaaaacttcctccaccg
gtactgcagtttgtggaagttactttcggatacacgcctgagaatctgatctacaagaac
ttggactttggggtagacttggactcaaggatagcattagtaggacctaatggtgcaggg
aagagtacactgctgaaactgatgacaggtgaattgactcctattgatggaatggtccga
cggcataaccatctgcgaattgcgcaattccatcagcacttggcagagaaactggatatg
gaaatgtcagctctccagtacatgataagagaataccctggaaatgaggaagagaagatg
agaggtgcaatcgggaagtttggattgtcagggaaagcgcaagtgatgccaatgaagaac
ctatccgatggacagaggagtcgagtcatcttcgcgtggttagcatttcgacaaccccac
ttgctgctgctagatgagcccactaaccatttggatatcgagacgatcgattcactggcg
gaagcattgaacgagtgggacggtgggttggtactggtgagtcacgatttccggctgata
aaccaggtagccgaggagatatgggtgtgtgaaaatcaagctgcaacacgatgggaaggg
gacatcatggacttcaagcagcatctcaagagtaaagctggtttatctgattga
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