Gossypium hirsutum (upland cotton): 107927098
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Entry
107927098 CDS
T04793
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107927098
09122 Translation
03015 mRNA surveillance pathway
107927098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107927098
Spliceosome [BR:
ghi03041
]
Complex A
Other components
Complex A specific factors
107927098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
107927098
NCBI-ProteinID:
XP_016713562
UniProt:
A0A1U8LG05
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All DBs
Position
D03:50373181..50377113
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AA seq
449 aa
AA seq
DB search
MHHQRMYGQDGGEAAPPSYAGGYGGSGGYGGGGGYAGGGGRGGSGGHGGRGGGGGYGGGY
QNRGGGGGYQGGERAGRGGGGRGGGRGGSGRDGDWLCPNPSCGNLNFARRVECNKCGAPS
PAGAGGDRGSGSTSGGYSRGGGGGGYGGNRGGRDGGRGGYDGARNNNYDGGRGGNNDNRS
SGSRGGSYGSSQGGEDSGYGQVPPAPNSYGGNYPPAPNTYGGNANYGMDSVPPPTSYTGG
STSYPPSYGGPVGGYAGEGLSDVRTGGRGGPPGGYGSGGPRNQGGGYGGPPVEAPAKIKQ
CDGNCGDSCDNSRIYITNLPPDVTIEELRDLFGSIGQVGRIKQKRGYKDQWPWNIKIYTD
DKGNQKGDAVLSYEDPQAAHSAGGFFNNHVMRGYTIGVAMAEKTALKVHDHGGGKGGYGG
GGDRRRDSYRDGGSGPDRHHHGGNRSRPY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcaaaggatgtacggtcaagacggaggcgaagctgctccgccttcatatgct
ggtggttatggaggatctggaggctatggcggcggcgggggttacgctggtggtggcgga
cgaggtggaagtggaggtcatgggggtcgtggtggaggtggaggatatggcggtggttat
caaaatcgaggaggcggtggaggctaccaaggaggagagcgtgctggcagaggtggcggc
ggaagaggtggtggtcgtggtggaagcggacgtgatggtgattggctttgccctaacccc
agctgtgggaacttgaactttgcaagaagagttgaatgtaacaaatgcggtgcaccatct
cctgcgggtgctggtggtgatcgtggtagtggtagtactagtggtggttatagcagagga
ggtggtggtgggggatatggcggtaatcgcggaggtagagatgggggtagaggtggttat
gatggtgcgaggaataacaactatgatggaggcagagggggaaataatgataatagaagc
agtggtagtagaggtggttcttatggaagtagtcaagggggagaagatagtgggtatggt
caagttcctccagcacccaattcttatggtgggaattatccacctgctcctaatacatat
ggtgggaatgcaaattatggaatggactcagtccctccacctacgagctatactggtgga
tctacatcataccctccatcttatggtggccctgtgggtggttatgctggtgagggtttg
agtgatgtgaggactggtggtcgtggtggacctcctggtgggtatggttctggtggtcct
cgaaatcagggaggtggttatggtggtcctcctgttgaagcaccggctaagatcaagcag
tgtgacggcaactgtggggattcttgcgataactcaagaatatacataacaaatttgcca
cctgatgttactattgaagaattaagagacctttttggcagcattggacaagttggaaga
attaagcagaagcgtggctataaagatcaatggccatggaatattaaaatatacacagat
gataaaggaaaccagaaaggcgatgcagttttgtcttacgaagatcctcaggctgcccac
tctgctggcggtttctttaacaatcatgtcatgagaggctatacgatcggcgtggctatg
gcagagaagactgcgctcaaagtacatgatcatggaggtggtaaaggtggctacggaggt
ggtggcgacaggcgcagggatagttacagagatggtggttctgggccagataggcatcac
catggcggaaatcgctcgcgcccatactga
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