Gossypium hirsutum (upland cotton): 107927106
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Entry
107927106 CDS
T04793
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107927106
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
107927106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
TPR_2
TPR_MalT
DUF1400
Motif
Other DBs
NCBI-GeneID:
107927106
NCBI-ProteinID:
XP_016713571
UniProt:
A0A1U8LG44
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Position
D03:complement(50892141..50901066)
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AA seq
689 aa
AA seq
DB search
MEAAAEGLWGLADEFEKKGEIGKAVKCLEAICQSHASFLPIVEVKTRLRIATLLLRHSHN
VNHAKSHLERSQLLLNSIPSCFDLKCRTYSLLSQCYHLVGAIPPQKQILYKALHLTSAAA
PDVSAKLWCCNFNSQLANALIIEGDYQNSISTLESGYVSATQICYPELQMFFVASILHVR
LLMQWDDQTANEVERALQRCNQVWETMPSDRRAHCMGLLFYNELLHIFYRLRVSDYKNAV
KHVDKLDAAMKQDSKSRGQLTRFTTTTTTSAGNDSLEPTYFGNAKRALQDKLFLAPPPIN
GEWLPKSAVYALVDLMVIIFGRPKGNFKECDKRIQSGIHIIKEELIRLGITDDVREVDLQ
HSAIWMAGVYLMLLMQFLENKVAVELTRSEFLEAQEALVQMKNWFIRFPTILQACESIIE
MLRGQYSHSVGCYNEAAFHYVEAAKITESKSMQIMCQAYAAISYFCIGDAESSSQALDLI
GPVYRMKDSFVGVREEASILFAYGLLLMKQQDLQEARNRLAKGLQIAHVQMGNLQLVSQY
LTILGNLALALHDTGQAREILRSSLTLAKKLGDVPTQIWVLSVLTGLFQQLGERGNQMEN
DEYRRKKFDELQSRLADARSSIYHIELIDKVKLQVQQFHEIDMKRTMAGESMRVNLDIPE
SVGLSTPMPVPSSSRLVDLDTGRRGKRKL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgcggcagaagggctgtggggactggcggatgagtttgagaagaagggagag
atagggaaggcggtgaagtgcttggaggcaatctgccagtctcacgcttccttccttccc
atcgttgaggtgaagactcgactccgcatagccactcttctgctgcgccactctcacaac
gtgaaccatgctaagtcccacctcgaacgctcacaattgctccttaattccataccttca
tgcttcgacttgaagtgccgaacctactcactgctcagtcagtgctaccatctcgttggg
gctatccctcctcagaagcagatcttgtacaaggctcttcaccttacttctgcggcggct
cccgatgtttcggccaagttatggtgttgcaacttcaattctcagctggcaaacgctctg
attattgaaggagactaccagaactcaatctccactttagaatcaggttatgtatccgct
actcaaatttgctatccggagcttcagatgttctttgtggcttctatcctgcatgtccgc
ctccttatgcaatgggatgatcaaactgcgaatgaggttgagcgagctcttcagagatgc
aatcaggtctgggagactatgccctctgataggagagcccactgcatgggtttactcttt
tacaatgagcttctccacatcttctatcgacttcgtgtctctgattacaagaatgctgtc
aaacacgtggacaaattggatgctgctatgaagcaagattccaagtctcggggacagctt
acccgttttactactaccactaccacttcagctggaaatgattctcttgaacccacatat
tttggaaatgccaaacgggcattgcaagataagctttttctcgcaccacctcccattaat
ggggaatggctgccgaaaagtgctgtctatgcccttgttgatcttatggtcatcattttt
ggccgtccaaaaggaaatttcaaagagtgtgataaacgaattcagtctggaatacatatc
atcaaagaggaactcatcaggcttggtataactgatgatgtgagagaagtggacttgcag
cactcagcgatctggatggctggtgtatatttaatgctgttgatgcagttccttgagaat
aaagtggccgtggagcttacacggtctgaatttcttgaagctcaggaggcattggtgcaa
atgaagaactggttcattcgctttccaacaattttacaagcttgtgagagcatcatcgaa
atgcttagggggcaatattcccattctgttggctgttataatgaagcagcttttcactat
gtagaagctgcaaagataactgagagcaaatcaatgcaaatcatgtgccaagcttatgca
gccatttcatacttttgcattggtgatgctgaatcgtcttcacaggcgcttgatttaatt
ggaccagtttacagaatgaaggattcctttgttggagttcgtgaggaagcaagcatcctt
tttgcttatggccttctattgatgaagcagcaagatctacaagaagcacgaaaccggctg
gccaagggtttgcagattgctcatgttcaaatgggaaacctccaacttgtttcacagtat
ttgaccattcttgggaatttggcacttgctctgcatgacactggacaagccagagagatc
ctaagatcctcactaactttagcgaagaagcttggtgatgtcccaactcagatatgggtt
ctgtctgttttgacaggtctttttcaacaattaggtgagaggggaaatcaaatggagaat
gatgagtacagaagaaaaaagttcgatgaattgcaatcgagacttgctgatgcacgttca
tccatttatcatattgaacttattgacaaagtaaaacttcaagttcagcaatttcatgag
attgatatgaagcgtacaatggcaggcgaatctatgagagtcaatcttgacatcccagaa
tcagttggcttatcaacaccaatgccagtcccatcatcatcaaggctggttgatttagat
actggaagacgtggtaagagaaaactttaa
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