KEGG   Gossypium hirsutum (upland cotton): 107927165
Entry
107927165         CDS       T04793                                 
Name
(RefSeq) syntaxin-43 isoform X1
  KO
K08489  syntaxin 16
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    107927165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107927165
Membrane trafficking [BR:ghi04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    107927165
SSDB
Motif
Pfam: SNARE Syntaxin_2 Prominin EF-G-binding_N ZSWIM1-3_C MCPsignal DUF5388 VIT1
Other DBs
NCBI-GeneID: 107927165
NCBI-ProteinID: XP_016713676
UniProt: A0A1U8LGE2
LinkDB
Position
D11:62131251..62134621
AA seq 327 aa
MATRNRTLLFNKYRDALKGVRAPTSSSAAAKAPLKTSSGGSPAVEMASTSFLHSNRSYTA
LSSEDPGNSSKGAATVGLPPAWVDVSEEIASNVQRARVKMNELAKAHAKALMPSFGDGKE
DQQNIEALTTEITNLLKKSEKKLLQKLSAAGPSEDSNVRKNVQRQLATDLQNLSMELRKK
QSTYLKCLRQQMEDAADLEMNLNGNRPKEEDDDLDDMIFSEHQMARLKQSEVYTVERERE
IQQIVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEEGLKQLQKAERTQKQG
GMVMCATVLVIMCFVMLVLLILKEIIF
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcgacgaggaaccggacgctgttatttaataaatatagggatgcgttgaagggtgtt
agagctccgacgagctcgtcagctgcagcgaaggcaccgttgaagacgagctctggcgga
tcacccgcggtagagatggctagtacttcgtttctccattcaaatcggtcttatactgct
ctaagttccgaggatcctggaaactcaagtaagggtgcagctaccgttggtctaccacca
gcttgggtagatgtctctgaagaaatagcatcaaatgtgcaacgtgcaagggttaaaatg
aacgagttagccaaggctcatgcaaaggctttaatgccttcgtttggtgatggtaaagaa
gatcaacaaaatattgaggctcttactactgagataactaatctgttgaagaaatcagag
aaaaaattattacagaagctctctgcagctggaccttctgaggattcaaatgtcaggaaa
aatgttcagcgtcaacttgccactgaccttcagaacctttccatggagctccggaagaaa
caatcaacttatttgaagtgcctcaggcagcaaatggaggacgcagctgatctagagatg
aatctaaatggaaatagacctaaagaagaagatgatgacttggatgatatgatatttagt
gagcatcagatggcaaggctaaaacaaagtgaggtatatacagttgagagggaaagggag
atccaacagattgtggagtcggtaaatgagcttgctcagattatgaaggatctgtcagtt
cttgtgattgatcagggcactattgtcgatcgaatagactacaacattcagaatgttgca
actacggttgaagaaggcctcaaacagctacagaaggcggagagaacacagaaacaagga
ggaatggtgatgtgtgctacagtgcttgttattatgtgctttgtcatgctagtcctctta
atcctcaaggagataatcttttga

DBGET integrated database retrieval system