Gossypium hirsutum (upland cotton): 107927165
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Entry
107927165 CDS
T04793
Name
(RefSeq) syntaxin-43 isoform X1
KO
K08489
syntaxin 16
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107927165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107927165
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
107927165
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GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
EF-G-binding_N
ZSWIM1-3_C
MCPsignal
DUF5388
VIT1
Motif
Other DBs
NCBI-GeneID:
107927165
NCBI-ProteinID:
XP_016713676
UniProt:
A0A1U8LGE2
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Position
D11:62131251..62134621
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AA seq
327 aa
AA seq
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MATRNRTLLFNKYRDALKGVRAPTSSSAAAKAPLKTSSGGSPAVEMASTSFLHSNRSYTA
LSSEDPGNSSKGAATVGLPPAWVDVSEEIASNVQRARVKMNELAKAHAKALMPSFGDGKE
DQQNIEALTTEITNLLKKSEKKLLQKLSAAGPSEDSNVRKNVQRQLATDLQNLSMELRKK
QSTYLKCLRQQMEDAADLEMNLNGNRPKEEDDDLDDMIFSEHQMARLKQSEVYTVERERE
IQQIVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEEGLKQLQKAERTQKQG
GMVMCATVLVIMCFVMLVLLILKEIIF
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaaccggacgctgttatttaataaatatagggatgcgttgaagggtgtt
agagctccgacgagctcgtcagctgcagcgaaggcaccgttgaagacgagctctggcgga
tcacccgcggtagagatggctagtacttcgtttctccattcaaatcggtcttatactgct
ctaagttccgaggatcctggaaactcaagtaagggtgcagctaccgttggtctaccacca
gcttgggtagatgtctctgaagaaatagcatcaaatgtgcaacgtgcaagggttaaaatg
aacgagttagccaaggctcatgcaaaggctttaatgccttcgtttggtgatggtaaagaa
gatcaacaaaatattgaggctcttactactgagataactaatctgttgaagaaatcagag
aaaaaattattacagaagctctctgcagctggaccttctgaggattcaaatgtcaggaaa
aatgttcagcgtcaacttgccactgaccttcagaacctttccatggagctccggaagaaa
caatcaacttatttgaagtgcctcaggcagcaaatggaggacgcagctgatctagagatg
aatctaaatggaaatagacctaaagaagaagatgatgacttggatgatatgatatttagt
gagcatcagatggcaaggctaaaacaaagtgaggtatatacagttgagagggaaagggag
atccaacagattgtggagtcggtaaatgagcttgctcagattatgaaggatctgtcagtt
cttgtgattgatcagggcactattgtcgatcgaatagactacaacattcagaatgttgca
actacggttgaagaaggcctcaaacagctacagaaggcggagagaacacagaaacaagga
ggaatggtgatgtgtgctacagtgcttgttattatgtgctttgtcatgctagtcctctta
atcctcaaggagataatcttttga
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