Gossypium hirsutum (upland cotton): 107927309
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Entry
107927309 CDS
T04793
Name
(RefSeq) cyclin-H1-1 isoform X1
KO
K06634
cyclin H
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
ghi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107927309
09124 Replication and repair
03420 Nucleotide excision repair
107927309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107927309
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107927309
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107927309
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107927309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
HEPN_RnaseLS
REV1_C
Motif
Other DBs
NCBI-GeneID:
107927309
NCBI-ProteinID:
XP_016713864
UniProt:
A0A1U8LL14
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Position
D11:complement(61329919..61333940)
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AA seq
332 aa
AA seq
DB search
MADFHASTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARD
NADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEH
HPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRS
VEGFVNDMEEFCGVKDDENQMLKDLQETARLEVDKIMLTDAPHLFPPGQLALAALRNANE
MRRVLDFEGYLRRILARQNSKHTILQLIESLDAIDAWVRKFKFPTEKDMKHINRKLKSCW
GHSSHDDSKKREKKRHKSHKSLNEAHNGPTLA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttcatgcatcgactcatagagctaactggatcttctctcctcaagaactg
gttgagaaatacaaggctgcaaatcaaagagcaatacaaacactggagaagtatgggaca
acacaaatggaagtagatgctgatggttcactatcataccctgaacctattgcaagagat
aacgccgacaagcattctcgtccaaaacctcttaacattgaagaagaacagttcatgcga
gtgttttatgagaacaaacttcgagaagtttgtagtgcattctactttcctaataaaatt
caggcaactgctctaatttatttcaaaaggttttacctgcaatggtcggtcatggaacat
catccaaaacatataatgttaacctgtgtgtatgcggcctgtaagatagaagaaaatcat
gtgtcagcagaggagcttggtaaggggatttcacaggatcatcaaatgattctcaattac
gagatgatagtgtatcagagtctggaatttgatctcattgtttatgcaccctatcgttca
gttgaaggttttgtcaatgacatggaggaattctgtggagtaaaggatgacgaaaatcaa
atgctgaaggatttgcaagaaactgcaaggttggaagttgacaaaattatgcttactgat
gctccacatctttttcctcctggccagttggcactggctgctttacgcaatgcgaatgag
atgcgtagagttctcgactttgagggatacctaagaagaattcttgcacgccagaattcc
aagcacaccattttgcagctgatagaatctctagatgctatagatgcttgggttaggaaa
ttcaagttccccacagaaaaggatatgaagcacataaaccggaaactgaaatcttgttgg
gggcatagctcgcacgacgacagtaagaagcgggagaagaaacggcacaaatcccataag
agtttgaatgaagctcataacggaccgacccttgcttaa
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