KEGG   Gossypium hirsutum (upland cotton): 107927309
Entry
107927309         CDS       T04793                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03022  Basal transcription factors
ghi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107927309
  09124 Replication and repair
   03420 Nucleotide excision repair
    107927309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107927309
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107927309
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107927309
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107927309
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B HEPN_RnaseLS REV1_C
Other DBs
NCBI-GeneID: 107927309
NCBI-ProteinID: XP_016713864
UniProt: A0A1U8LL14
LinkDB
Position
D11:complement(61329919..61333940)
AA seq 332 aa
MADFHASTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARD
NADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEH
HPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRS
VEGFVNDMEEFCGVKDDENQMLKDLQETARLEVDKIMLTDAPHLFPPGQLALAALRNANE
MRRVLDFEGYLRRILARQNSKHTILQLIESLDAIDAWVRKFKFPTEKDMKHINRKLKSCW
GHSSHDDSKKREKKRHKSHKSLNEAHNGPTLA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggctgattttcatgcatcgactcatagagctaactggatcttctctcctcaagaactg
gttgagaaatacaaggctgcaaatcaaagagcaatacaaacactggagaagtatgggaca
acacaaatggaagtagatgctgatggttcactatcataccctgaacctattgcaagagat
aacgccgacaagcattctcgtccaaaacctcttaacattgaagaagaacagttcatgcga
gtgttttatgagaacaaacttcgagaagtttgtagtgcattctactttcctaataaaatt
caggcaactgctctaatttatttcaaaaggttttacctgcaatggtcggtcatggaacat
catccaaaacatataatgttaacctgtgtgtatgcggcctgtaagatagaagaaaatcat
gtgtcagcagaggagcttggtaaggggatttcacaggatcatcaaatgattctcaattac
gagatgatagtgtatcagagtctggaatttgatctcattgtttatgcaccctatcgttca
gttgaaggttttgtcaatgacatggaggaattctgtggagtaaaggatgacgaaaatcaa
atgctgaaggatttgcaagaaactgcaaggttggaagttgacaaaattatgcttactgat
gctccacatctttttcctcctggccagttggcactggctgctttacgcaatgcgaatgag
atgcgtagagttctcgactttgagggatacctaagaagaattcttgcacgccagaattcc
aagcacaccattttgcagctgatagaatctctagatgctatagatgcttgggttaggaaa
ttcaagttccccacagaaaaggatatgaagcacataaaccggaaactgaaatcttgttgg
gggcatagctcgcacgacgacagtaagaagcgggagaagaaacggcacaaatcccataag
agtttgaatgaagctcataacggaccgacccttgcttaa

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