Gossypium hirsutum (upland cotton): 107927314
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Entry
107927314 CDS
T04793
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107927314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107927314
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107927314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
zf-Sec23_Sec24
Sec23_helical
Vps36-NZF-N
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
107927314
NCBI-ProteinID:
XP_040966396
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MGTENPGRPNFPMRPPPGPFASAPPTMTPFSSSRPTPPSAPPTMTPFSSAGPRPLARFSD
QSVPPPPITSVPPVGGPYQQFPTSPFPSTAQSPPIRAPPEGQPPFQPRASQVSASSVSFP
PQSQVPPVPMGSSPQSVNFSPSGVNVPQPPTGLLFSGPRPNIQPTFSPPDSSYSATKSNF
LPPFPGYPSKKPAVSQAPSPFPAQQGSFMPPPPASSSPFSSQQGSYAPPPPVAASLGYQS
RGQMQHPSSAPPIGGIQSLTEDFSSLSLASLPGSIDPGCDHRTLPRPLDGDEEPSSFTKM
YPMNCNPRYLRLTTSGIPSSQSLASRWHLTLGAVVCPLAEDPEGEEVPVINYISTGIIRC
RRCRAYVNPYVTFTDARRKWRCNICALLNDVPGDYFANLDATGRRIDLDQRPELLKGSVE
FVAPTDYMNRPPMPPLYFFLIDVSLSAVRSGMIGVVAQTIRSCLDELPGFPRTQIGFITY
DSTIHFYNMKSSLAQPQMMVVSDLDDIFVPLPDDLLVNLSESRNVVETFLDSLASMFQDN
VNVESAFGPAVKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDLRAYGTDKEHLLRL
PEGSFYKQMAADLTKYQIGVNVYAFSDKYTDIASLGTLAKYTGGQVYYYPNFQSSIHGEK
LRHELVRDLTRETAWEAVMRIRCGKGIRCTSYHGNFMLRSTDLLALPTVDCDKAYAVQLS
LEETLLTTQTVYLQAVLLYTASCGERRIRVHTAAAPVVTDLGEMYRQADTGAIFSLFCRL
PIEKTLTNKLEDARNSLQLRIVKALREYRNLYAVQHRLGSRMIYPDSLKFLCVDTSFLIK
RGRLGF
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggggactgaaaaccctggtcgtccgaattttcccatgagacctccccctggccctttt
gcttctgctccgccaactatgacacctttttcatcatctagacctaccccaccaagtgct
cccccaactatgactcctttctcatcagctggacctagaccgctagctcgttttagcgat
caatcagtaccacctccacccataacatctgttccacctgttgggggaccttatcagcaa
tttccaacatcaccgtttccttcaacagctcaatccccccctatacgtgcaccacccgag
gggcagccaccatttcaacctcgtgccagtcaagtatctgcttcatctgtttctttccct
ccacaatcacaagtaccaccagtgccaatgggatcttcaccacaatctgtaaatttttct
ccatctggtgtgaatgttcctcaacctccaacaggtttattgttttcggggcctagaccc
aatattcagccaactttctcccctccagattcatcttattctgccaccaaatccaatttc
ctgccaccttttcctggatatccaagcaagaaacctgcagtttcacaagcaccttcacct
tttcctgctcagcaaggaagttttatgcctcctccaccagcatcatcttctcccttttct
agtcagcaaggaagttatgctcctcccccaccagtagctgcttccttgggctaccagtca
aggggccaaatgcagcatcctagctctgcacctcctattggtggcatccaaagcttgaca
gaagattttagttcactctctcttgcatctttgcctggatcaattgatcctggatgcgat
catagaacacttcctaggccgttggatggtgatgaggagccaagttctttcaccaagatg
tatcctatgaactgcaatcccagatacctacggcttactacaagtggcataccatcttct
cagtctttagcttcaagatggcatttgactcttggagctgttgtctgtcctcttgcggag
gatcctgaaggggaggaagtgccagtcattaattacatttcaactggcattattcgctgt
agaagatgtcgcgcatatgtgaatccctatgtcacttttacagatgctagaagaaagtgg
cgctgcaacatctgcgctttactaaatgatgttcctggtgactattttgccaacttggat
gccactggcagaagaattgatttggatcagcggcctgaacttctaaaaggcagtgtggaa
tttgttgcaccaactgattacatgaatcggccaccaatgccgccactatatttttttctc
attgatgtttcactatctgcagtaagaagtggcatgattggggttgttgctcaaactatc
cgttcgtgtttggatgagctgcctggtttccccagaacacagattggttttattacttat
gacagcacgattcatttttacaacatgaagtcgtctcttgcacagcctcaaatgatggta
gtttcagatctggatgatatatttgtcccattgccagatgatctccttgtcaacttatct
gaatcaagaaatgttgttgaaacattcctggatagcttggcgtctatgtttcaggacaat
gtgaatgtggaatctgcttttggtcctgcagttaaggcagcattcatggttatgagtcaa
ctcggaggtaagttgctaattttccagaacacattgccttccctgggagttggacgcttg
aagttgcgtggagatgatcttcgtgcgtatggaactgataaggaacatttattgcgatta
ccggaaggttccttctacaagcaaatggcagctgatcttacaaagtaccagataggggtt
aatgtttatgcttttagtgataaatacactgacatagcttccttaggaaccctggcaaag
tatactggaggtcaggtatattattatccgaacttccaatcaagcattcatggtgagaaa
ttgaggcatgaattagtcagagatcttactagggagactgcctgggaagcagttatgcgc
ataagatgtggaaaaggaattcgatgtacatcttatcatgggaactttatgctgaggtcc
acagatttattagcacttccgactgtagattgtgataaagcatatgcagtgcagttatcc
cttgaggagacactgcttacaactcagacagtatatctccaagctgttctactatacact
gcatcctgcggagagaggcgcatcagggtgcatacagcagctgcccctgttgttacagat
ctaggggagatgtaccgacaggctgacaccggtgccatcttttctttattttgtaggcta
ccaattgagaaaacattgaccaataaacttgaagatgctagaaattctttgcaactaagg
attgtaaaagcactcagagaataccgcaatctctatgctgtgcagcatcgcttgggatct
aggatgatttatccagattctctaaagttcctgtgtgttgacacctcttttttgataaaa
cggggtcgacttgggttttga
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