Gossypium hirsutum (upland cotton): 107927595
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Entry
107927595 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: SUN domain-containing protein 2
KO
K19347
SUN domain-containing protein 1/2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107927595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107927595
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
107927595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
SHOCT
Fzo_mitofusin
Gal4_dimer
Motif
Other DBs
NCBI-GeneID:
107927595
NCBI-ProteinID:
XP_016714189
UniProt:
A0A1U8LLX4
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All DBs
Position
A05:complement(108470455..108473972)
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AA seq
463 aa
AA seq
DB search
MSASTLSISANPAVSARRRPVLLAENKSNFESIPAEPNPIGVNVGEDKATGAANSRDLSH
HSVRAEALKDSGQARKVTVAQNSNVPLRRTRKGVVNKTEKPRWQTVVSIFIKNLVLLLVL
AGLVQMVRRLALKSGEVSRAGTEVSLTEFEGRVAEVENFLKTTAKMIQVQVEVVDRKLEN
EIGGLRRELNERIDDQSVALGNSLKILEEKSEGLDKSLRELKSANLLTKEEFENMYEQMX
KEKGGNGKTEMAVSLSDIGAYAREIVKNEIEMHASDGLAKADYALFSGGGKVVRHSEPFL
AGKGSNWFSKGSQNVVHPNADKMLKPSFGEPGQCFPLKGSSGFVQIKLRTAIIPEAITLE
HVAKNVAYDRSSAPKDCRISGWMQGRDLDLPIDPNKMFVLAEFMYDLEKSSAQTFDVSDA
GGVGIVDTVRLDFSSSHGSTSHTCIYRLRVHGHEPDSVSMVKM
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcatctacgctctccattagcgccaaccctgccgtgtccgctcgtcgccggcct
gtcctccttgccgaaaataaatcgaacttcgaatcaattcccgccgaacctaaccctatt
ggcgttaatgttggcgaagataaagccaccggcgccgctaacagcagagatctgagccac
cattcggtccgggccgaggcgttgaaggactctgggcaagccagaaaagtcactgtggct
caaaactcaaacgttccgctgcggcgaacacggaagggagtggtcaacaagacggagaaa
ccccggtggcagactgtggttagtatttttattaagaatttagtgcttttacttgttttg
gctgggttagttcagatggttaggagattggctttgaaatcgggggaggttagcagggct
gggacagaggtcagcttaaccgaatttgaaggtagagttgctgaggttgagaactttttg
aaaactactgctaaaatgatacaggttcaggtagaggttgttgatcggaaacttgaaaat
gaaattggtgggttaaggagggaattgaatgagagaatagacgatcaaagtgtggcattg
gggaattcattgaaaatattggaagaaaagagcgagggattggataagtccttgcgtgaa
ttgaagagcgcgaatttgttgaccaaggaagaatttgagaatatgtatgaacaaatgntt
aaagagaagggtggaaatggtaagactgaaatggcagtgagtttgagtgatataggagcc
tatgcaagagagattgtcaagaatgagattgagatgcatgcctcagatgggcttgccaag
gccgattatgcgctgttttcgggtggaggaaaggttgtcaggcattctgagccctttctt
gctggaaagggaagcaactggttttcaaaaggtagtcaaaatgtggttcatcccaatgca
gacaagatgttgaagcctagttttggggaaccaggacagtgttttccgttaaaaggaagt
agcgggtttgttcagatcaagctgcgtacggctattatccctgaggctattactttggaa
catgttgccaagaatgtggcatatgatagatccagtgcacccaaggactgccgtatctct
ggttggatgcaaggtcgtgatctggatttaccaattgaccccaataagatgtttgtttta
gcagaattcatgtacgaccttgagaagagtagtgctcagaccttcgatgtatcagatgcg
ggtggtgttggcattgtggacacagttaggctagatttctcttccagccatggaagcact
tcacatacctgtatttatcgattgagggtgcacggtcatgagcctgactctgtttcaatg
gtaaaaatgtag
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