Gossypium hirsutum (upland cotton): 107927600
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Entry
107927600 CDS
T04793
Name
(RefSeq) retinoblastoma-related protein
KO
K04681
retinoblastoma-like protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107927600
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
107927600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFIIB
Motif
Other DBs
NCBI-GeneID:
107927600
NCBI-ProteinID:
XP_016714201
UniProt:
A0A1U8LHX0
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All DBs
Position
D04:complement(2642510..2649815)
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AA seq
1019 aa
AA seq
DB search
MEDMKSSVTTSGGTDGDAVEARFNALCKNGLSLDEKACSNATKLFKETKHLLTPNVSAIG
SGTLEEAERFWFSFVLYSLKRLSEKVGENTQHESDESGFSLCQILRATKLNIVDFFKELP
QFVVKAGPVLRNMYGEDWETRLEAKEMQANFVHLSLLSKSYKRAFWELFLTSDANIDKQQ
NATSSPDYVSECHRFGWLLFLALRVHAFSRFKDLVTCANGFVSILAILIIHVPVSFRNFK
INDSPHFVKKGDKGVVDLLASLCNMYDASEDDLRKTMEMANKLIEDILKKKPCPAAKCKT
ETLENIDTDSLIYFEGLMEEQSLSSSLKILEKDYDDAICNKGDLDERLFVNDEDSLLGLG
SLSGGAMNVTGIKRKLDSVASPSKSISSPLSPQRSSASHANGVLGPPNAKMAATPVSTAM
TTAKWLRSVICPLPSKPSAELQHFLSSCDKDVTTDVICRVHIILEAIFPRNQECSVTGSL
QSVNLMDNIWMEHRRLEARKLYYRVLEAMCTAEAQILHAPNLTSLLTNERFHRCMLACSA
ELVLATHKTATMLFPTVLDRTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES
MVWDKGSSMYNSLIVAKPALSAEINRLGLLAEPMPPLDAIATHINFSGGTPPVPPLQKHE
TSTGNAGSSILGQNGDVRSPMRPCTELRSVLVERNAFTSPVKDRLLALSNLKKAPLQSAF
ASPTRPNPGGGGETCAETGINIFFSKINKLAAVRINGMVERLQLSQQIRESVYSLFQKIL
NQRTSLFFNRHIDQIILCCFYVVAKISQLRLTFKEIICNYKKQPQCKPQVFQSVFVDRSS
ARRNGRTGQDNVDIIAFYNETFVPSIKPLLGELGSAGTTTRTSRVAEANNSNDGTCPGSP
KVSPFPSLPDMSPKKVSATHNVYVSPLRTSKMDALISHSSRSYYACVGESTRAYQSPSKD
LTAINNHLNGGRKIRGALNFDDVDVGLVSDSMVANSLYLQNGSCASSSGAPLKSEQPES
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatgaagtcttcagttacaacttctggtggcacagatggcgatgccgttgaa
gctagattcaatgctttgtgcaagaatgggttatctctggatgagaaagcttgctcaaat
gctacgaagctattcaaagaaacaaagcaccttttaacgccaaatgtttcagcaattggg
agcggaacgctggaagaagcagagcgattttggttttcatttgtcttatattcgctcaag
cggctgagtgaaaaggttggagaaaatacgcaacatgagtctgatgaaagtgggttttcg
ttatgccagatattgagagctacaaagctgaatatcgtggatttttttaaggagttgcct
cagtttgtggtaaaagctggtcccgttttacgtaacatgtatggtgaagattgggagact
cgactagaggctaaggagatgcaggccaattttgtgcacttgagccttctaagcaagtca
tacaagcgtgcattttgggaactcttcttgacaagtgatgcaaatattgacaagcagcaa
aatgctaccagttcaccagattatgtatcagagtgccatcgatttggatggttactgttt
ttggcactccgcgtgcatgcattcagtcgttttaaagacctagtgacctgtgcaaatggt
tttgtttctatactggctattttgattatacatgttcctgttagcttcagaaacttcaag
atcaatgactctcctcattttgttaagaaaggtgacaaaggtgttgtcgacttgcttgcg
tcactttgcaacatgtatgatgcttcagaagatgatttgaggaaaacaatggagatggcc
aataagttaatagaagacatattgaaaaaaaagccatgtccagcagctaagtgcaaaact
gaaacactggaaaatattgataccgatagcttgatctattttgaaggtttaatggaggaa
caatctctttcatccagtttgaaaattttagaaaaggattatgatgatgcaatttgtaat
aaaggtgatctggatgagaggttgtttgtaaacgatgaagatagtttacttggtttagga
agcttgtctggaggggccatgaatgttactggtatcaagaggaaacttgattcggtagct
tcaccatcaaagtcgatctcaagcccactgtctcctcaacgctcttctgcatctcatgca
aatggtgtccttgggccgccaaatgcaaagatggcagctacaccggtcagcactgcaatg
acaactgcgaaatggcttcgttctgttatttgtcctcttccttcaaaaccttcagctgag
ttgcagcattttttatcatcttgtgataaagatgttaccactgatgtgatatgtagggtg
catataatattggaagcaatatttcctagaaatcaagagtgtagtgtaactggaagcctt
cagagtgtaaacctgatggataatatatggatggaacatcgaagactggaggcacgtaag
ttgtactatagggttttggaagctatgtgtactgcagaggcccaaatattacatgcacct
aatttgacctctttattaactaatgagaggtttcatagatgcatgcttgcttgttctgct
gaactagtgctggcgacacataagactgccacaatgttgtttcctacagttctggacaga
actggtattacagcctttgatttgagcaaggtgatagagagttttattagacatgaggag
tctctaccaagggaactgaggcggcatctaaattctctggaagagaggcttttggagagc
atggtgtgggataaaggttcctcaatgtacaattctttgatagttgcaaaacctgcccta
tctgccgaaataaatcgtcttggcttattggcagaaccaatgccacctttggatgcaatt
gcaacacatataaacttttctggaggtacacctccggtgcctcctttgcagaagcatgaa
acatcaacggggaatgctggtagctcaatcttaggacaaaatggggatgtcaggtctccc
atgagaccttgcacggagttgaggagtgtgttggttgaacggaatgcttttacatcacca
gtgaaggatcgtctattagcattaagcaatcttaagaaggcacctttgcaatctgcattt
gccagtccaacacgccctaaccctggtggtggaggagaaacatgtgcggaaacaggaata
aatatattttttagcaagattaataagttggctgctgtccggattaatggcatggttgag
aggctacaactgtctcaacagataagggagagtgtgtattctcttttccaaaaaatactt
aaccagaggacttctttgttctttaaccgtcatattgaccagatcatcctttgttgtttc
tatgtagtcgcgaagatatctcagttgcgcctgactttcaaagaaattatttgcaactat
aagaagcaaccacaatgtaagccacaagttttccaaagtgtatttgttgacaggtcatct
gcacgaagaaatgggagaactgggcaggacaatgttgatatcattgcattctacaacgaa
acattcgttccttccataaagcctttgctgggagaacttggttctgctggaacaaccaca
agaacgagtagagttgctgaagccaacaatagtaatgatggtacatgccctggatctcct
aaagtttctccttttccaagtctccctgatatgtccccaaagaaagtatctgcaacgcat
aacgtatatgtgtctccattgcggacatccaagatggatgctctaatctcgcatagctca
agaagctactatgcttgtgttggagagagtactcgtgcctatcagagcccttcgaaagac
ctaactgctatcaacaatcacttgaacggtggcaggaagatcagaggggcactcaacttc
gacgatgttgatgtcggcttggttagtgattctatggttgcaaatagcctttacctgcaa
aatgggagctgtgcatcctcatccggtgcacctttaaaatccgagcaaccggaatcttag
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integrated database retrieval system
