Gossypium hirsutum (upland cotton): 107927955
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Entry
107927955 CDS
T04793
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107927955
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
107927955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
Motif
Other DBs
NCBI-GeneID:
107927955
NCBI-ProteinID:
XP_016714580
UniProt:
A0A1U8LJ87
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Position
A03:111494151..111500206
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AA seq
515 aa
AA seq
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MVSDSDLVARLREILRDSDLDTATAGSVRKQLEKDFGIDLSDRKSFVRDQIDIFLETLNR
DNEKEREDEQAPESENEELQEENDDEEEEESKGEGSQNTRRSKSDKKAKKRGGGFQTVCS
LSPQLQRVVGESKLARTEVVKKLWAYIKEKDLQDPKNKRNIICDELLRDIFRVNSINMFQ
MNKALTKHIWPLSVEDEDSNHEMECEDNDDSASMNAESAKGEVKEEEKEEDDSVSMNAES
AKGEENEEEKEEDDSESLNAENSKEEKEEEKEGEQEEEEDNEEEEEEQEGNSRRSKKKRS
SKGDKDVKRRGGGFTKLCSLSPQLQAFIGESELARTEVVKRLWTYIREKNLQDPKDKRNV
LCDDSLYALFRVKSINMFQMNKALSKHIWPLNEEEVAVQADSAKTERKSKQARERVAEEP
KQKEKKQKKGASGFLAPLPLSDALVKFFATGENALSRADVVKKMWEYIKQNDLQDPSDKR
RILCDDKLKELFEVDSFNGFAMTKLLTTHFIKMEQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggattcggacctcgtagcccggctccgagaaatcctccgggattcggacctc
gacaccgccaccgccggtagcgtaaggaaacaactcgagaaagatttcggcatcgactta
tctgataggaaaagtttcgttagggaccaaatcgacattttcttagaaaccctaaatcga
gataatgaaaaagaaagagaagacgaacaagcgccggaatctgaaaatgaggagcttcaa
gaagaaaacgatgatgaagaagaagaggaaagcaagggagaaggaagtcaaaatacaagg
agaagtaaatctgataagaaagcgaagaaaagaggaggtggttttcagacagtgtgtagc
ctttctcctcagcttcaaagagtagtaggagagtctaaattggctagaactgaggttgta
aagaaactttgggcatatatcaaggagaaggatttgcaagacccaaagaacaagcggaat
attatctgtgatgaattacttcgtgacatttttcgagtaaattctattaatatgttccaa
atgaataaagccctgaccaagcatatctggccgttaagcgtagaagatgaagattcaaat
catgagatggaatgtgaagacaacgatgattctgcatccatgaatgctgaaagtgcaaag
ggagaagtgaaagaagaggaaaaggaggaagatgattctgtatccatgaatgctgaaagt
gcaaagggagaagagaatgaagaggaaaaggaagaagatgattctgaatctttaaatgct
gaaaattcaaaagaagagaaagaagaggaaaaggaaggggagcaggaggaggaggaggac
aacgaagaagaagaagaagagcaagagggtaattcacgtagaagcaagaaaaaaaggtca
tctaaaggagataaagatgtgaagagaagaggaggtgggtttactaaattgtgtagtctt
tctccacagcttcaggcatttattggagaatctgagttggccagaactgaggttgtcaag
agattgtggacctatatccgagagaagaatttgcaagatccaaaggacaaaagaaatgta
ttatgtgatgactcattgtatgctctttttcgtgtgaagtccatcaacatgtttcagatg
aataaagctctgtctaaacacatatggccattaaatgaggaagaagtggcagttcaagct
gactctgcaaaaacagaaagaaaatctaaacaagcaagggaacgggttgcagaagaacca
aaacagaaagaaaagaagcagaagaaaggggcatctggttttcttgctcctcttcctctt
tcagatgctctagtgaaatttttcgctactggtgaaaatgcattatctcgtgctgatgtt
gtgaagaaaatgtgggagtacataaaacagaatgatctacaggatccatctgataagagg
aggattttatgcgacgataagctcaaagaacttttcgaggtggactccttcaatggcttt
gctatgacaaagcttctgaccacccatttcatcaagatggaacagtga
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