Gossypium hirsutum (upland cotton): 107928014 Help Entry 107928014         CDS       T04793                                  Name (RefSeq) squalene synthase 2   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi00100   Steroid biosynthesis ghi00909   Sesquiterpenoid and triterpenoid biosynthesis ghi01100   Metabolic pathways ghi01110   Biosynthesis of secondary metabolites Brite KEGG Orthology (KO) [BR:ghi00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     107928014   09109 Metabolism of terpenoids and polyketides    00909 Sesquiterpenoid and triterpenoid biosynthesis     107928014  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:ghi01006]     107928014 Enzymes [BR:ghi01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      107928014 Prenyltransferases [BR:ghi01006]  Terpene biosynthesis   Squalene/phytoene synthase    107928014 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Motif Other DBs NCBI-GeneID:  107928014 NCBI-ProteinID:  XP_016714662 UniProt:  A0A1U8LJ88 LinkDB All DBs Position A03:112179116..112184723 Genome browser AA seq 412 aa AA seqDB search MGSLGALVKHPDDFYPLLKLKMASRHAERQIPSEPHWAFCFSMLHKVSRSFALVIQQLDI ELKNAVCIFYLVLRALDTVEDDTSVATDIKVPILKEFYRHIYDPDWHFSCGTKNYKVLMD EFHHISTAFLELEKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL SKLFHACGTEDLAPDTLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWGKYVNKL EDLKYEENSVKAVQCLNDMITNALIHVDDCLKYMSALPDPAIFRFCAIPQVMAIGTLALC YNNIEVFRGVVKMRRGLTAKVIDRTNTMADVYGAFYDFSCMLKAKVDKNDPSAQKTSSRL DSILKTCRDSGVLNERKSYIIPNQTNYTPLLAVLLFILLAIIFANRGPSGPN NT seq 1239 nt NT seq  +upstreamnt  +downstreamnt atggggagtttaggagctcttgtgaaacacccagatgatttttatccattgttgaagctg aaaatggcttcaaggcatgccgagagacagatcccatcagagcctcactgggctttttgt ttctctatgcttcacaaagtatctcgtagttttgctctcgttattcaacagctcgacatc gagcttaaaaacgctgtctgcatattttatttggttcttcgagctcttgatactgttgag gatgacactagtgtggcaacagatatcaaagttcctattcttaaagaattttatcgtcat atatatgatcctgattggcacttttcgtgcggtacgaagaactacaaagttcttatggat gagtttcatcatatatctactgcttttttggaactcgaaaaaggttatcaggaggcaatt gaggatattacgaaaagaatgggtgcaggaatggcaaaatttatttgcaaagaggttgaa acagttgatgactacgatgaatattgtcactatgtagcaggactcgtgggattaggtctt tccaaacttttccatgcatgcggtacagaagatttggctcccgatactctctccaattca atggggttatttcttcagaaaacaaatataatccgagattatctcgaggatatcaatgag ataccaaagtcgcgtatgttttggcctcgtcaaatttggggtaaatatgtcaacaaactt gaggacttgaaatatgaggaaaactcggtcaaggcagtgcagtgcttgaatgacatgatt actaatgctttaatacatgtggatgattgcctaaaatacatgtctgctttacctgatcct gcaatctttcgattttgtgctatccctcaggtcatggctatcggaacactagccttatgc tacaacaacatcgaagtcttcagaggcgtagtgaaaatgaggcgcggtctcactgcgaaa gtcattgaccgaaccaacacgatggctgatgtctatggtgctttctatgatttttcttgt atgttgaaagctaaggtcgacaaaaacgatcctagtgcacaaaaaacgtcaagcagactt gattcgatcctcaagacttgcagggactcaggggtcctgaatgaaaggaaatcttacata attccaaatcagaccaattacactccacttctggctgtcttgcttttcattttactggcc attatttttgctaatcgaggccccagtgggccaaattaa

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