Gossypium hirsutum (upland cotton): 107928049
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Entry
107928049 CDS
T04793
Name
(RefSeq) ribonuclease 1-like
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107928049
Enzymes [BR:
ghi01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
107928049
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
107928049
Prokaryotic type
107928049
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
107928049
NCBI-ProteinID:
XP_016714693
UniProt:
A0A1U8LMJ2
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Position
A06:complement(124130316..124131567)
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AA seq
238 aa
AA seq
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MGIKQFIGYALVVFASLVVSAQGSDFAFYKLSLIWPTSACYPLSNCKTPLPTFFTIHGLW
PTFANDTAVPAYGPNNRCNANPVGPDAAVARLTPIQDRLNQRWPNLRAGVENSVFWRHEW
QNHGICSDYPQDPLSYFNDTLNLATSTKFDPFKALGVQPSNTPYLLNTLLQNVYKNVGAY
PQISCSQRSGGALYLKEIRFCLTRTKKTPPSVVQSCPTRVAGGCKDPLTNNVHFPPAS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgggtattaagcaatttataggttatgctttagttgtgtttgcaagcttggtggtgtca
gctcagggctccgattttgcattttataaactgagtctgatatggccgacttctgcatgt
tatccactctccaactgtaagactccattacctactttcttcaccatccatgggttatgg
ccaacatttgccaatgacaccgcagttcctgcttatgggcctaataatagatgcaatgcc
aatcctgttggtcccgatgctgctgtggctagactaacacccattcaagacagactaaac
caaaggtggccaaaccttagggcaggggtcgaaaactctgttttttggagacatgaatgg
caaaaccatgggatatgctctgattatcctcaagatcctttgagttattttaatgatacc
ttaaatcttgcaacttccaccaaattcgaccctttcaaagctttgggagttcaaccatca
aacactccctatcttttaaacacattgctacaaaatgtgtacaagaacgtgggagcctat
cctcaaatctcatgcagtcaacgatcaggaggcgcactttatctgaaagagatccgtttc
tgcctcacaaggaccaagaaaacgccaccttcggtggttcaaagctgccccaccagagtt
gccggtggatgtaaagaccctctcaccaacaatgttcactttccccctgccagttag
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