KEGG   Gossypium hirsutum (upland cotton): 107928223
Entry
107928223         CDS       T04793                                 
Name
(RefSeq) protein CIA1-like
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107928223
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107928223
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    107928223
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107928223
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_EML Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_ELP1_1st PROPPIN Beta-prop_HPS5 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 107928223
NCBI-ProteinID: XP_016714898
UniProt: A0A1U8LN63
LinkDB
Position
D01:62537750..62543000
AA seq 350 aa
MELLDGNLELKEIQKLQGHTDRVWSLAWNPATAAADVPKVFASCSGDKTVRIWEESPSTR
SWDCKAVLEETHSRTVRSCAWSPSGRLLATASFDATTAIWENVGGDFECVSTLEGHENEV
KSVSWNASGSLLATCGRDKTVWIWEVMPGNEFECIQVLQGHTQDVKMVEWHPTMDILFSC
SYDNTVKVWWSDDADGDWSCVQTLGESSNGHSSTVWSLAFNAKGDKLVTCSDDLTMKIWE
ADIIRMQSGDGYAPWNHLCTLSGYHDRTIFSVHWSREGIIASGAADDAVRLFVESKDGSM
NGSSYQLLLKKEKAHDMDVNSVQWCPGEKRLLASASDDGTIKIWELGTLP
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggagttgttagatggaaacttagagctcaaagagattcaaaagcttcaaggtcatacc
gatagggtttggagcctcgcctggaatcccgccaccgccgctgccgacgttcccaaggtt
ttcgcttcttgtagcggcgataagaccgttcgaatctgggaagagagcccctctactcgc
tcctgggactgcaaggctgttttggaagaaacacacagtagaaccgtccgatcctgtgct
tggtcaccatctgggagattgttggccactgctagctttgatgcaaccactgccatatgg
gaaaatgttgggggtgactttgaatgtgtttctactttggagggtcatgaaaatgaagtg
aaaagtgtgtcttggaatgcatcaggttctcttcttgcaacatgtgggcgagataaaact
gtttggatttgggaagtgatgccagggaatgaatttgagtgtattcaagttttgcaaggt
catactcaagatgttaaaatggttgagtggcatccgactatggatattttgttttcctgt
agttacgataacactgtgaaggtatggtggtcagatgatgctgatggtgattggagctgt
gtacaaactttaggtgaatctagcaatggtcattcttccaccgtctggtcgcttgctttt
aatgctaagggagacaaattggtgacttgtagtgatgatcttaccatgaagatatgggaa
gcagacatcataaggatgcagtctggtgatggttatgcaccctggaatcatctgtgcaca
ctctcaggttatcatgatcgaaccatcttttcagttcactggtcaagagagggaattatt
gccagtggagctgctgatgatgctgtaaggttgtttgtagagagcaaagatggttcgatg
aatggatcttcatatcaattgctattgaagaaggagaaggctcatgacatggatgtaaat
tcagtacaatggtgccctggggagaaacgtctacttgcttcagcaagtgatgatggaacc
ataaagatatgggagttgggaactttgccttga

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