Gossypium hirsutum (upland cotton): 107928261
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Entry
107928261 CDS
T04793
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107928261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107928261
03041 Spliceosome [BR:
ghi03041
]
107928261
03032 DNA replication proteins [BR:
ghi03032
]
107928261
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
107928261
Spliceosome [BR:
ghi03041
]
Complex A
U1 snRNP components
Sm proteins
107928261
U2 snRNP components
107928261
Complex B
U1 snRNP components
107928261
U4/U6.U5 tri-snRNP components
107928261
Complex C
U2 snRNP components
107928261
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107928261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
107928261
NCBI-ProteinID:
XP_016714938
UniProt:
A0A1U8JTM2
LinkDB
All DBs
Position
D08:complement(67812258..67814335)
Genome browser
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
NVKKKSRKSLGRILLKGDNITLMMNSGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccaaagtacagaggattatgacccaacccatcaacctgatcttcaggttt
ctccaaagtaaagctcgcattcagatttggcttttcgagcagaaagatttgaggattgaa
ggccgaatcattggttttgacgagtacatgaatttagttcttgatgatgctgaagaagtt
aacgtcaagaagaaaagccgaaagtcattaggaaggattcttcttaaaggagacaacatt
actcttatgatgaatagtggaaaatga
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