Gossypium hirsutum (upland cotton): 107928341
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Entry
107928341 CDS
T04793
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107928341
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107928341
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
107928341
NCBI-ProteinID:
XP_016715018
UniProt:
A0A1U8LNH5
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Position
A08:complement(125109303..125118638)
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AA seq
1130 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSSREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLLDEELV
LDRVASSKHAGVSEYDPQGSDVPQEQVPSNSEAMPMDCSGDQVEDLAANSEFIDYDQDPG
TPGLVEVPNLSGVHEALAGGDHAEPEHDNLTELANSKCVENASNKSNLHHEDNKPLDQSL
ENEINHDAVVIEPPENDCHISDMEKEQTKPQESSLPDAVSVECASAVGTVRGPDGSDRVE
EMHNGGMHSIDRTDRECAESPSCSNVTFDLDEPARRTSSNSTCVPVSDGNLENDQALQKF
EFGNEAEATGNLEESHGKAIASNPSCPLESPSRPTVIDGEAQAFQEPNVSENPKETGIHE
EVSSVQVLGSNNLAAAEQNSVDLSQREEEVHASGAPIEVQGEVCQTQMVEPAFCGHQLEN
SNSCAMSDLPAPERLLSAPEELLDKPSDLLVESTPDKQVLAGNDEIDAGTKLISGKKRSL
TESTLTVESINSVESFGRPQSMRTAESVPDDDDLLSSILVGRKSSVFKMKPTPQFEVASR
KRTRSAAKPSATKRKVLMDDTMVLHGDTIRQQLVNTEDIRRIRKKAPCTRSEISLIQRRF
LEDEIFSESVLTGMSGDLTRLHSEQYDLSSIRISEGDQNHASNEVAKDSGCSVRPDIAEG
GIEGSSVPLINGNDEQAQSVGITVHTKTQQGEYSDLNEGTTVHTETQQGEHSDLNSQQDR
NPVDGITEMEIDKDNAEAVNASNHFVLNEFGVSSPTNLGTEFLLEESKANTSADGSIAEC
FAPIENGTNSLVTLQTGESVNGSQNAYEAENDKVDVIDEAQVEVALLDHDDKDPIRKDIE
ECKMDSTYSENVDVVLNNASLNMGETSTFQEVDAVNKEMTSLVDNQAEFEDVAIGNDTEF
LNVDDDELGEDDDNGMPGGDESRLLENSGWSSRTRAVAKYLQNLFEDEAVHGRKALSMDS
LLARKTRKEASRMFFETLVLKTKDYIHVEQGKPFDDICIKPRLKLLKSDF
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacagtttatattggcgaagaaaggtcccttgggtacgatatggatagca
gctcatctggagaggaagctccgtaagaatcaggtggctgatactgacatcggtgtttct
gttgactctattctgtttcctgatgtaccaattgcactacgattgtcaagtcatcttctt
ctcggagtggtgaggatatattctagaaaggtgaattacctttttgatgattgcagtgaa
gccttgcttaagataaagcaggcttttcgctccactgcagttgatttgccaccggaagaa
tcaactgcgccttaccattcaatcactttgccagagacttttgatcttgatgactttgag
ctgcctgataatgagatctttcagggtaactatgttgatcatcatgttagctcaagagag
cagattacgcttcaagataccatggacggtgttgtttactccacatcacaatttggattg
gatgaacgttttggtgatggtgacacttctcagattggtctgcttgatgaggagcttgtc
ctagatagggttgcatcatccaaacacgctggagtgtcagaatatgatccccaagggtca
gatgtaccacaagagcaagtcccaagtaattcagaagctatgccaatggattgcagtggg
gatcaggtagaagatctcgctgcaaattcagaatttattgattatgatcaagatccaggt
actcctggattagtggaggtgcctaacttgtctggtgttcatgaggcgctggcaggtggt
gatcatgcagaaccagaacatgacaatcttacagaattggccaactcaaagtgtgtagaa
aatgcttctaataaatcaaatcttcaccatgaagataacaaaccattggatcagtcattg
gaaaatgaaataaatcatgatgctgttgttatcgagcctcctgagaacgattgccatatt
agtgacatggagaaagaacaaactaaaccacaggaaagttctctccctgatgctgtgtct
gtggagtgtgcatctgctgttgggactgtcagaggacctgatggttcggatagggtggaa
gagatgcataatggcggtatgcactcaattgatagaactgacagggaatgtgcagaatct
cctagctgctccaatgtcacctttgatttggatgaacctgctcgaagaacaagttcaaat
agcacctgtgtgcctgtgtcagatggcaatttggaaaatgatcaagcattacaaaaattt
gaatttgggaatgaagcggaagccactggtaatttggaagaatcacatggcaaagcaata
gcttcaaatccttcctgtccattggaatcacctagtaggccaacagtaattgatggagaa
gctcaagcttttcaagaaccgaatgtctctgaaaatcctaaagaaactggtattcatgaa
gaggtctcgtctgttcaagttcttgggagcaataatttggctgctgctgagcagaactct
gtggatctgtcccaaagggaggaggaagttcatgcttctggagctccaattgaggtgcaa
ggtgaagtctgccaaactcagatggtggaacctgctttttgtggtcatcagttggaaaat
tcaaatagttgtgctatgtctgacttgcctgcacctgaaaggttactctctgcaccggaa
gaactgcttgataaaccaagtgatttgctggttgagtctaccccagacaaacaggtccta
gcagggaatgatgaaattgatgctggaacgaaactcatttcaggaaaaaagcgaagttta
actgaaagtacactaactgtagagagtataaactcggttgaatcatttggcaggcctcaa
tccatgagaactgcagaatcagttcctgatgatgatgacttgttgtcttctattttagtt
gggagaaaatcttcagtttttaaaatgaaaccaactcctcagtttgaagttgcatcaagg
aaacgcacacgatctgcagcaaaacctagtgccaccaagagaaaagttcttatggatgat
actatggttttacatggcgatacaatacgtcagcagttggttaatactgaagacatacgt
cgtattcgcaagaaagcaccttgcactcgctctgaaatttcattgattcagagacgattc
ttggaagatgaaatctttagtgaatctgtacttactggtatgtcgggtgacttgacacgt
ttgcacagtgaacaatatgatctaagcagtatcaggatttctgaaggtgatcaaaaccac
gcatcaaatgaagtagctaaggattcagggtgctctgtcagacctgatattgctgaaggt
ggaattgaagggagctctgtgcctttaattaatggcaatgatgagcaagcacagtctgtt
ggtattactgttcacaccaaaactcagcagggtgaatacagtgatctgaatgagggtact
actgttcacactgaaactcagcagggtgaacacagtgatctgaattctcaacaggataga
aatcctgtcgatgggatcacagaaatggaaattgacaaagataatgctgaagctgttaat
gcatcaaatcactttgttctaaatgagtttggggtgtcatccccaactaatcttggtact
gagtttttgttggaagaaagtaaagccaatacatcagctgatggtagtatagcagaatgc
tttgcacctattgaaaatgggactaattctcttgtcactttacaaactggtgagtctgtg
aatggttctcaaaatgcatatgaagctgaaaatgataaggttgatgtgatagatgaggct
caagttgaggttgcactcttggatcatgatgacaaggaccctatccgtaaggatattgaa
gaatgtaaaatggattctacatattcagaaaatgttgatgtggttctgaacaatgcttca
ttaaatatgggagaaacctcaacctttcaggaagtcgatgcagtcaataaagaaatgacc
tctcttgtggataatcaagctgagttcgaggatgttgccattggaaatgatacagaattc
ctgaatgtagatgatgatgagctaggtgaagatgatgataatggcatgccgggcggtgat
gaaagtcgtcttcttgaaaatagtggatggtcttctcgtaccagggctgttgccaagtat
ctccagaatttattcgaggatgaagctgtacatggacgtaaggcactttctatggacagt
ctattggctcgtaaaacacgtaaagaggcatcgaggatgtttttcgaaacactggttctt
aagacaaaagattacatccatgtagaacaggggaaacccttcgatgatatctgtataaag
cctcgattgaagctcttaaaatcagatttctga
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