Gossypium hirsutum (upland cotton): 107928605
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Entry
107928605 CDS
T04793
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107928605
03012 Translation factors [BR:
ghi03012
]
107928605
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107928605
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-3
107928605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
107928605
NCBI-ProteinID:
XP_016715353
UniProt:
A0A1U8LPI0
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Position
A12:8909045..8912941
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AA seq
715 aa
AA seq
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MAAEVMLMNEIEAKAASMGIDLNIDFNSIQLPRGEDCGIVSDDEDVYHDDHLEFDSGFGN
VIVVDNLPVVPREKFEKLEGVIRKIYSQIGVIKEDGLWMPVDPETKKTLGYCFIEYNTPQ
EAELAKEKTNGYKLDRAHIFAVNMFDDFDKYMRVPDEWAPPEIKPYTPGENLQKWLTDEK
ARDQFVIRAGTDTEVLWNDARQSKTELVYKRTYWTESFVQWSPLGTYLATVHRQGAAVWG
GANTFNRLMRYAHPQVKLIDFSPGEKFLVTYSSHEPSNPRDANRVVINIFDVRTGKVMRD
FKGSADEFTIGGAGGVAGVSWPVFRWGGGKEDKYFAKLGKNMISVYETETFSLIDKKSLK
VENVVDFSWSPTDLILALFVPELGGGNQPARVSLVQIPSKVELRQKNLFSVSDCKMYWQS
NGEYLAVKADRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFA
VIHGDNPRPDISFYSMKSSHNLGRVSKLTTLKGKQANALFWSPGGRFIVLAGLKGFNGQL
EFFNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFHGKLLYRILK
DHFFQFLWRPRPPPFLSAEKEEEILKYLKKYSKKYDAEDQDVSMLLSEQDREKRRMLKEE
WEKWISEWRRASEEEKLERQKLRDGEASDEEEEYEAKEVEVEEILDFSEEVLFEE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggtgatgctaatgaacgagatagaggcgaaggctgctagcatgggcatc
gatttgaatatcgatttcaattccattcaacttcctcgtggtgaagattgtggcatcgtc
agtgatgatgaggatgtttaccatgacgatcacttggaattcgattccgggtttggaaac
gttattgtagtggataatctcccggttgttccgcgtgaaaagtttgagaaactcgagggt
gtcattcggaaaatctatagtcagattggagtcattaaggaggatggtctttggatgcct
gttgatcctgagactaagaaaaccctaggttattgttttatagagtacaatacaccacag
gaagctgagcttgctaaggagaagaccaatgggtacaagttggatagagcacatattttt
gctgttaatatgttcgatgattttgataagtacatgagagttccggatgaatgggctcct
cctgagattaaaccctacacgcctggggaaaatcttcaaaagtggcttactgatgaaaag
gcacgagatcaatttgtaattcgtgctggcactgacactgaagttctgtggaatgatgca
aggcagtctaaaaccgagctcgtttacaaacgcacttactggaccgaaagttttgtgcag
tggtctcccctggggacatacttggcaacagttcacaggcaaggagcagcagtttgggga
ggtgcaaatacatttaatcgtctaatgcgttatgcgcatcctcaggttaagcttattgat
ttttctcctggtgaaaaatttttagtaacctacagcagccatgaaccaagcaatcctcgt
gatgcaaatagggttgtgataaacatttttgatgtgagaaccggaaaagtgatgagagat
tttaagggaagtgctgatgaatttacaattggaggagctggtggtgttgctggagtttct
tggcctgttttcagatggggaggcggaaaagaggacaagtattttgccaaacttggaaaa
aatatgatatctgtttatgaaacagagacctttagccttattgacaaaaaatctttgaag
gttgaaaacgttgtggacttcagttggtcaccaactgatctcattcttgcactttttgtt
cctgaacttggaggtggaaaccagcctgctagagtgagtcttgttcaaattcccagtaaa
gtggaattgaggcaaaagaatcttttcagcgtcagcgactgcaaaatgtactggcaaagc
aacggtgaatatcttgctgtaaaagctgaccgatacacaaaaacaaaaaaaagcacttat
accggttttgagctctttcgcatcaaggaaagagacataccaattgaggttttggagctt
gataataaaaatgataagataattgcttttgcttgggagccgaaggggcacaggtttgct
gttatacatggggataatccaaggcctgatattagcttttactccatgaaatcatcgcac
aatttgggccgcgtttcaaagctcactactctgaaaggcaagcaggcaaatgcgttattc
tggtcacctggtggccgttttattgtacttgctggattgaaggggttcaatggtcagttg
gaattctttaatgtcgatgagcttgaaacaatggcaactgctgaacattttatggccaca
gatattgaatgggatcccactggaagatatgttgcaaccgcagtaacatctgttcatgaa
atggaaaatggtttcaatatatggtcctttcatggtaagctactctaccggatactgaag
gatcatttcttccagttcttgtggcgcccaaggcccccacccttcttgagcgctgagaag
gaggaagagatattaaaatacttgaagaagtacagtaagaagtatgatgcagaggaccag
gatgtttcgatgctattgagcgaacaggatagggagaagagaaggatgttgaaggaagaa
tgggagaagtggataagcgaatggaggcgggcaagtgaggaagagaagttggagaggcag
aagttgagggatggagaagcaagtgatgaggaagaggagtacgaggccaaagaagttgaa
gttgaggaaatcttggacttctccgaagaagtcctttttgaagagtga
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