Gossypium hirsutum (upland cotton): 107928829
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Entry
107928829 CDS
T04793
Name
(RefSeq) thioredoxin-like protein YLS8 isoform X1
KO
K12859
U5 snRNP protein, DIM1 family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107928829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107928829
Spliceosome [BR:
ghi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107928829
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_8
Thioredoxin_7
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
107928829
NCBI-ProteinID:
XP_016715596
UniProt:
A0A1U8LLV6
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Position
D01:complement(1029367..1032287)
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AA seq
142 aa
AA seq
DB search
MSYLLPHLHSGWAVDQAILAEEERVVIIRFGHDWDETCMQMDEVLSSVAEKIKNFAVIYV
VDITEVPEFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacctgttgccgcacttgcattcggggtgggccgtcgatcaggccatcctcgcc
gaagaagaacgcgtcgtcatcatccgtttcggccatgattgggacgaaacttgcatgcag
atggatgaagtcctttcttcagttgctgaaaaaataaagaactttgccgtaatttacgtc
gttgacataaccgaagtgcccgagttcaacacgatgtacgagctttacgatccgtccacg
gtcatgttcttctttcgaaacaagcacatcatgattgatctcggcaccggaaacaacaac
aaaatcaattgggcactcaaggacaagcaagagttcatcgacatcgtcgaaactgtatac
cgcggagcaagaaagggtcgcggtctcgtgattgctccgaaagattactcgactaagtac
cggtactaa
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