KEGG   Gossypium hirsutum (upland cotton): 107928842
Entry
107928842         CDS       T04793                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107928842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107928842
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107928842
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107928842
SSDB
Motif
Pfam: zf-C3HC4 RING_XB3-XBAT31 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 zf-RING_5 zf-C3HC4_3 Prok-RING_4 Baculo_IE-1
Other DBs
NCBI-GeneID: 107928842
NCBI-ProteinID: XP_040942594
LinkDB
Position
D01:complement(1243797..1246133)
AA seq 254 aa
MANERYIEEAEVRSYLLESKNSMEKWVNSPETVTGSDDNPSAGFDCNICLDTVQDPVVTL
CGHLYCWPCIYKWLHCQSISTESHDQKQPQCPVCKAEVSASTIVPLYGRGQMSMASRGKA
PQLGIVIPKRPVGPDFGTPRSPNSATSPQFTHQIHHHHHGYSYQPQVSDYPSSPMLSPGG
TMMNVPDPVTRIFGEMVYARVFGESITNLYAYPNSYNLTGSTPRIRRHLKQADKALNRIS
FFLFCCLIICLLSF
NT seq 765 nt   +upstreamnt  +downstreamnt
atggccaatgagcgctacatcgaagaggccgaagttcgaagctatttattagaaagcaaa
aattccatggagaagtgggtgaattcgccggaaacagtcacgggttcggacgataatccc
tcagccggttttgactgcaacatttgcctcgatactgtgcaagatccggtggtgacgcta
tgcggtcacctatattgttggccttgtatttacaaatggcttcactgtcaatccatctcc
actgaaagccatgaccaaaaacagccgcaatgccccgtatgtaaggccgaagtttcggct
tcgacaatcgtaccactttatggtcggggccagatgagtatggcatcaagaggcaaggct
ccccaacttggcatagtcattccaaagagacctgttggtcctgattttggcacaccaaga
tcacctaatagtgccactagtccacaatttacacatcaaatacatcaccatcaccatggc
tattcatatcaaccacaagtgtccgattatccgtcttcgccgatgcttagtcccggcggc
acaatgatgaacgtgccggatccagtgacccgaatattcggtgaaatggtatacgcaagg
gtatttggggagtcaattacgaacttatatgcgtatccgaattcatacaatcttaccggg
agcacccctaggatcagaaggcacctaaagcaagcggataaggcactaaacagaataagc
tttttcctcttctgttgcttaatcatatgccttctttcattttga

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