KEGG   Gossypium hirsutum (upland cotton): 107928930
Entry
107928930         CDS       T04793                                 
Name
(RefSeq) WD repeat-containing protein 13
  KO
K24739  WD repeat-containing protein 13
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ghi04990]
    107928930
Domain-containing proteins not elsewhere classified [BR:ghi04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   107928930
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_TEP1_C Beta-prop_Aladin NBCH_WD40 Beta-prop_ACSF4 CPSF_A Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 Beta-prop_EMC1_N Beta-prop_RIG_1st KNTC1_N WD40_RFWD3 Beta-prop_VPS8 WD40_like Beta-prop_NWD2_C Beta-prop_SPT8
Other DBs
NCBI-GeneID: 107928930
NCBI-ProteinID: XP_016715726
UniProt: A0A1U8LM91
LinkDB
Position
D01:275485..280753
AA seq 508 aa
MAEVTSMNNCSKDGGATEAVTNNGCTINGTGKDMIKVTVKKANVKDPEIFSCLVQPASSD
SDLDSVGVRRFLLARKAESGVHRRLDWRCNGKGYVAYRNYIRRPRNWENSQIPSYPSTPG
NSGRWMLTSSPLSRLSEVESWSSSKDLRSGTLASNHRTSFSSSISDSDHPRGQGVEPAYS
FVGMHCIFDQCKSAVTVLKFGHMSSDLLAYGASDGTLTVCNVSDPPTVINQLKGHSKDVT
DFDFSSNNQYIASSSADKTVRVWELSKGFCIRVIYGVSPQLCIRFHPVNNNFLSVGNANK
EITVFNFSTGRVIAKSIFDSEVTSMDHDHTGHLIFCGDAQGCIYSVTMDSHTGALSRSHR
YRSSSKQKFPITTVQYRSFSLLAGGPVLLTCTKDGSLSFFSVALEVQGYLTLRCSLKLTP
RIHSIRASFCPLLSLNKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVLVVAWNH
GENFLASADLYGVVIVWKRAKTSYKGNI
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggcggaagttacgagcatgaacaactgctccaaagacggcggagccaccgaagctgtg
actaataacggctgtactatcaacggtaccggtaaggatatgattaaagtcactgtaaag
aaagcgaatgtgaaagatccggaaattttcagttgcttggttcagccggcgagttccgat
tcagatctcgattcagtcggtgttcggcgatttctactcgctcgcaaagctgagtccggt
gttcatcgccgacttgattggagatgtaatggaaaaggttatgtggcctatcgaaattac
attcgtaggccaagaaactgggaaaattcacaaataccaagctatccaagcactcctgga
aacagtgggcgatggatgttaacttcaagtccactctcgcgtttgtccgaggtggaaagc
tggagctcaagcaaggatttacggagtggtactctggcttcaaaccatagaacaagtttc
agctctagcattagtgatagtgatcacccacgtggacaaggagttgaacctgcatattct
tttgtaggaatgcactgcatctttgatcagtgcaaatcagctgttacggttttgaagttc
gggcacatgagttctgatctacttgcatatggggcttcagatgggactttaacagtttgc
aatgtctctgacccccctacagttatcaatcaattaaaagggcattcaaaagatgtcaca
gattttgacttctcgtcaaacaatcaatatattgcatcatcatcagcagataagactgtg
cgagtatgggaattatcaaaaggcttttgcatacgagtaatatatggagtctctccacaa
ttgtgtattcgctttcatcctgtaaataacaacttcctttcagttggcaatgcaaataaa
gagattactgtgttcaatttcagcacggggagagttattgccaaatccatcttcgatagt
gaggttacctcaatggaccatgatcatacgggtcatctcattttctgtggtgatgcacag
ggatgtatatactctgtaactatggactcccacacaggtgcgttatcccgttctcatcgt
tatagaagtagcagtaaacagaaatttccgatcacaactgtgcagtaccgaagtttctcg
ttactggctggtggcccagtgttgctgacatgtactaaagatggaagtctttctttcttt
agtgttgctttggaagtacaaggttatttgaccctgcgttgctcacttaaattaactccg
agaatacacagtattcgagcatccttctgccctttgctttccctcaataagggagaatat
atagttgctgggagcgaggattcaaatgtctatttctatgatttaactcgaccgaaacat
acatgtgtaaataagctacagggtcatcgttttccggttttagtagtagcttggaatcac
ggggagaactttttggcttcagcagacctgtacggcgtcgttatagtatggaagagagca
aaaacaagttataaaggcaatatataa

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