Gossypium hirsutum (upland cotton): 107929132
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Entry
107929132 CDS
T04793
Name
(RefSeq) F-box/LRR-repeat protein 4 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107929132
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107929132
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box_5
F-box
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
107929132
NCBI-ProteinID:
XP_016715972
UniProt:
A0A1U8LN35
LinkDB
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Position
D09:53112236..53116371
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AA seq
607 aa
AA seq
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MRGHDWINTCLPDELILEILRRLDSKSSHDACSLVCKRWLGLERLSRSTLRIGASGSPDI
FIKFLAQRFVNVKAVHIDERLSISLPVTAGKRRRRDENSLLSLKIHFAGERNEPKEEECE
PFCLTDSGLTAVADGFAKLEKLSLIWCSNVTSFGVMSLAQKCSLLKSLDLQGCYVGDQGL
AVVGQCCKQLEDLNLRFCESLTDSGLVTLATECGKSLKSLGVAACARITDKSLEAVGSHC
KNLETLSLDSEFISNKGILAIAQGCPLLKVLKLQCINVTDRALMAVGASCLSLEMLALYS
FQQFTDEGLRSIGKGCKKLKNLTLSDCNFLGDRGLEAIATGCTELTHLEVNGCHNIGTIG
LESVGKSCPRLTELALLYCQRVGNFALTEVGRGCKYLQALHLVDCSSIGDEAICSIAKGC
RNLKKLHIRRCYEVGSKGIVAVGENCHSLTDLSLRFCDRVRDEALIAVGHGCPLKYLNVS
GCNQIGDAGIVAVARGCPNLTYLDVSVLQNLRDIALTELGEGCPLLKDIVLSHCHQITDI
GLSHLVKNCQMLESCHMVYCPSITAAGVATVVSSCPNIKKVLVEKWKVSPRTKRRASSVL
SYLCVDL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggccatgattggatcaatacttgtcttcccgacgagctgatcttggagatctta
cgccggcttgattccaaatccagccatgatgcctgttctctcgtctgtaaacgttggctc
ggtctcgagcggcttagccgttccaccctccgaatcggcgcctctggtagccctgatatt
tttatcaagttcctcgctcaacggttcgttaatgtcaaggctgttcatatcgacgagagg
ttatcgatttctttgcctgttaccgcggggaaaaggcgtcgcagagacgagaattcgctt
ttgtctttaaagatacattttgcgggtgaaagaaatgagcccaaagaagaggagtgtgaa
ccattctgtttgacagattccggtttgactgcagttgctgatggatttgctaagctagaa
aagttgagcttaatttggtgttctaatgttactagtttcggtgtaatgtcccttgcacag
aaatgctcgctcttaaaatcattggatttgcagggttgctatgttggagatcaaggtcta
gctgttgttggccagtgttgcaagcaactcgaggacctaaatttgcgtttctgtgaaagc
ttgactgattcaggattggtcactttggcaactgagtgtgggaaatcattgaaatctctc
ggtgtggctgcttgtgctagaataaccgacaaatcactggaggctgtggggtcccactgc
aaaaatcttgagaccttgtcattggattcagagtttatcagcaataaagggatccttgct
attgcccaaggatgtcctcttttgaaagtcttgaagttacaatgtattaatgttacagac
agggctttgatggctgtgggagcttcttgtttgtcattggaaatgttggctttatacagc
ttccagcaatttacagacgagggtcttcgttctattggcaaaggctgcaagaagctaaaa
aatcttactttgagtgattgcaatttcctgggtgacaggggtctggaagcgattgccact
ggctgcactgaacttacgcatcttgaagttaatggctgccacaatattggaaccattgga
ctggagtctgttgggaaatcttgcccgcgcctgactgagttggctttattatactgccaa
agggttggcaattttgctcttactgaagttggaaggggctgtaaatacttgcaagctctt
cacttggtagactgctctagcattggtgatgaagccatttgcagtatagccaaaggttgc
cgaaatctaaagaagcttcatatcaggagatgttatgaggttggaagcaagggaatcgta
gctgttggtgagaattgtcactctctcacggatcttagtctccgcttttgtgatagggtg
cgcgatgaggctcttattgctgtcggtcatggatgtccattaaaatatctaaatgttagt
ggctgcaaccaaataggtgatgctggaattgtagccgttgcaagaggatgtcctaatctc
acttacctcgatgtcagtgttctccagaatttgcgcgatatagcactaaccgagttagga
gaaggttgccccttactcaaggatatagtactgtcccattgccaccaaataactgacatt
ggtctttcccacctcgtcaaaaactgccaaatgctcgagtcatgccacatggtgtactgt
ccgagcataaccgcggcaggagttgccaccgtggtctctagttgtcccaacataaagaag
gtcctggtcgagaaatggaaggttagtcccagaaccaaaagaagagccagttcagtcctt
tcttatctctgtgtagacctctaa
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