Gossypium hirsutum (upland cotton): 107929142
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Entry
107929142 CDS
T04793
Name
(RefSeq) protein argonaute 10-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107929142
03036 Chromosome and associated proteins [BR:
ghi03036
]
107929142
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107929142
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107929142
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107929142
microRNA pathway
RISC loading complex
107929142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Sas-6_C_CC
Motif
Other DBs
NCBI-GeneID:
107929142
NCBI-ProteinID:
XP_040957298
LinkDB
All DBs
Position
D09:complement(52079565..52086111)
Genome browser
AA seq
980 aa
AA seq
DB search
MPIRQMKESSEQHLVIKSHLQNTMNTVQRPPKTAQNGKGPPQAHEPHNNTKQPHNQATSP
PSKNRGRRRGRGGKKSDQLDVCMRPSSRPCTVAHKPVNQDSCGMEMGFPTSSKSLNFAPR
PGYGQVGTKCIVKANHFFAQLPDKDLNQYDVTITPEVASRTVNRAIIAELVRLYKESDLG
TRLPAYDGRKSLYTAGELPFAWKEFVVKLVDEEDGINGPKREREYKVVIKFVARANMHHL
GQFLAGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRAPQRLGDGLESWCGFY
QSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLLGKDVLSRPLSDSDRVKIKKALRGVK
VEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYSFTIQHTHLPCLQ
VGNQKKANYLPMEACKIVEGQRYTKRLNERQITALLKVTCQRPRDRENDILQTVQHNAYD
QDPYAKEFGIKISEKLASVEARILPAPWLKYHETGKEKDCLPQVGQWNMMNKKMINGMTV
SRWACINFSRSVQESVARGFCNELAQMCQVSGMEFNPEPVIPIYSARPEQVEKALKHVYH
ASMKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVA
LKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWP
EVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFY
RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPLVTFIVVQKRHHTRLFANNHRDRSSTD
KSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNN
LCYTYARCTRSVSVVPPAYYAHLAAFRARFYLEPEMQDNNSSTGAGSGQAKGGGTKAAGE
SGVRPLPALKENVKRVMFYC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgcctataaggcaaatgaaagagagctcagagcaacacctggtgataaaaagccacttg
caaaacactatgaacacagttcaaagaccacccaaaacagcacaaaatggcaaaggtcca
ccacaagctcatgaacctcacaacaacacaaaacaaccccataaccaagccacatcacct
ccatcaaagaatagaggaagaagaagaggaaggggtggtaaaaaatctgatcaactagat
gtttgtatgagaccaagttcaaggccttgcactgtagcacataaaccagtgaaccaagat
tcttgtggaatggaaatggggttccccacttcaagcaagtctttgaattttgcacctaga
cctggttatggtcaagttgggacaaaatgtattgtgaaggctaaccatttctttgctcag
ttgccagacaaggacttgaaccagtatgatgttacaataactcccgaagtagcatccaga
acggttaaccgagctattattgcagaacttgtgagactgtacaaagaatccgatttgggt
acgagattgccggcttatgacggcagaaagagtttgtacacggccggtgagcttccgttt
gcgtggaaggagttcgtcgttaagcttgtagacgaggaagatggcatcaatggccccaaa
agagaaagagaatataaagtggtaataaagtttgttgcacgagcaaacatgcatcattta
ggccagtttttagccggtaagcgagctgatgctccacaagaagcgctccaaatactagac
attgtattacgagagttatcgtcaaagaggtactgtcctattgggagatcgttcttttca
cctgatattagagcaccacaaaggcttggcgacggtttggagtcatggtgtggtttttac
caaagtattaggcctactcagatggggttgtctctgaacatcgatatggcttcagctgca
ttcatcgagcctctccctgtaatagagtttgttgctcagcttctaggcaaggatgtactg
tctaggccattgtcggattccgatcgtgtgaagattaagaaggcgctcagaggagtcaaa
gtagaggtgacacatagagggaatgtacgaagaaaataccgtgtttcaggattgacttct
cagcctactagagaactagtgtttccggttgacgataactctacaatgaagtctgttgtt
gaatacttccaagaaatgtatagcttcacaattcagcatacgcatctaccttgccttcaa
gttggaaaccagaagaaggcaaattatttacctatggaggcatgcaaaatcgtggaggga
cagagatatacgaaaagattgaatgagaggcaaattactgctctcttgaaagtcacatgc
caaagaccgagggatcgagaaaatgacattctgcagacggttcaacataatgcttatgat
caagatccttatgcaaaggagtttggaatcaaaattagtgaaaaactcgcttcggtcgag
gctcgtatccttcctgccccttggctgaaatatcatgaaactggaaaagaaaaggattgt
ttgcctcaagtggggcaatggaacatgatgaacaagaaaatgattaacggaatgactgtg
agccgatgggcatgtattaacttctcacgaagcgtgcaagagagtgttgctcgagggttt
tgcaatgaacttgcacaaatgtgccaagtttctggcatggagttcaatcccgagcctgtt
ataccgatctacagtgccaggcccgagcaagtggaaaaagctttgaagcatgtttatcat
gcatccatgaaaactaagggaaaagaactagagcttctattagctatattgcctgacaac
aacggctcgctttatggtgatctcaagcgaatttgtgaaactgatctaggattaatatca
caatgctgtctgacaaagcatgtctttaagatcagtaaacaatacttggctaatgtggcc
cttaagatcaatgttaagatgggtggcagaaacactgttcttttggatgctatcagctgc
cgaataccgttagttagcgatataccgaccataatattcggagcagatgtgactcacccg
gaaaatggagaagactcgagcccctcaatagcagcagtagtagcttcacaagattggccg
gaagtgacgaaatacgctggattagtttgtgctcaagctcatagacaagaactcatacag
gacttgtacaaaacttggcatgatcctgtacgtggcactgtcagtggtggcatgatcagg
gatcttctgatatcttttaggaaggccacggggcaaaagccgctgaggataatattttac
agggatggtgtgagcgaaggacagttttatcaagttttactgtacgagttagatgcaatc
cggaaggcctgtgcttctcttgaaccgaactatcaaccactggtgactttcattgtagtg
caaaaaagacatcacactcgtttgtttgctaataatcacagggaccgaagcagcacggac
aagagtggaaatattttgcctggcactgtcgttgattcgaaaatctgtcatccatcggaa
tttgacttctatctttgcagccatgccggtattcagggaacaagtcggcctgcacactac
catgttctttgggacgaaaacaattttactgcagatggaatacagtctctaacaaacaac
ctttgttacacgtatgcaaggtgcacgcgctcggtctctgttgttcctcctgcctattat
gcacatttagctgcattccgagcacggttctacctagaaccagagatgcaagacaataat
agctcaacaggcgctggttcaggtcaagcaaaaggtggtggtacaaaggcagcgggagaa
tccggggtgcggccgttgccggccttgaaagagaatgtgaagagagtgatgttctactgc
tag
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integrated database retrieval system
