Gossypium hirsutum (upland cotton): 107929303
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Entry
107929303 CDS
T04793
Name
(RefSeq) serine-rich adhesin for platelets
KO
K14295
nuclear pore complex protein Nup50
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107929303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107929303
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107929303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
107929303
NCBI-ProteinID:
XP_016716176
UniProt:
A0A1U8LNN6
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Position
D03:52008341..52013547
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AA seq
446 aa
AA seq
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MNGTKRFALSSSAADANDSAFRNKRIMAGYPFDPQRAEPSQQQPNATPALDPQRAELSRR
HVKALNIQFASWVQSQLKNHPDELWQDGVSDYLSHASHIMDKFSDVVNWLKANAANGDSL
SAAESHKNESKNVPETKNTENKFFQGKIGFTPTSTTTSLIPGSTTLSFSPGTTTMSFSPG
TTAGMFSLNTTTTRSTPADMTKKFPPLGTTTSFTSASSTTSFTPVGLTTSSMAAGSNSSF
SFGLSTANFTSSSTTNSFTSSNMTSSFASPWSTGAFSNSQSPFLFGTQSSVSVDNNAADD
ADDENELPRPSSPSVKKSEEKGIVVVHEVKCKLYVKSTDPEDKDSWKDKGTGQLSIKCKE
GISKGSKDSKPTIVVRNEVGKLLLNALLYPGIKTSAQKNSLVAIFHTSDEGGDNQEVVAR
TFLIRTKTEDDRNKLVTAIQEYAPAS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtacgaaaagatttgccttatcgagctcggctgccgatgccaatgattctgct
ttccgcaacaaaagaataatggcaggatatccttttgatcctcaaagggcagaaccatct
caacagcagccgaatgcaacaccagcattagacccacagcgagctgagttgtctcggcgg
catgtgaaagctctcaacatccaatttgcaagttgggtgcaatcacaactgaagaatcac
cctgatgagctttggcaagatggtgttagtgattacctaagtcatgcctcacatattatg
gacaagttcagtgatgttgtcaattggctcaaagcgaatgcggctaatggtgacagtttg
tctgctgccgaatcccataaaaatgaaagcaaaaatgttcctgaaaccaagaatactgag
aataagttttttcaagggaaaattggattcactccaaccagcacaactacaagccttatt
ccaggctctacaactctgagtttttctccaggcactacaaccatgagcttttctccaggc
accacagctgggatgttttctctgaacactacaactacacgctcgactccagctgatatg
actaaaaaatttcctccattgggtacaactactagctttacctcggctagttcaactaca
agcttcactccagttggtctgacaacaagctcaatggcagctggttcaaactcaagcttt
tcatttggcctttcaaccgcaaattttacttcctccagtacaacaaatagctttacttca
tctaacatgacttcaagctttgcatctccttggagcactggagcattctctaatagtcag
agccctttcttgtttggaactcagagctcagtttctgtggacaacaatgcagcagatgat
gcagatgatgaaaatgagttgccacggccaagcagtccatcagtgaagaagtcggaagag
aagggtattgttgttgttcacgaagtcaaatgcaagctttatgtcaagtcaactgatcct
gaagataaagattcatggaaagataaaggcactgggcaactttccataaaatgcaaagag
ggtatcagcaagggttcgaaagattccaagccaacaatcgttgttcgaaatgaggtggga
aagttgttactaaatgcattgctatatcctgggatcaaaacaagcgcacaaaagaattcc
cttgttgcaatatttcatacctcagatgaaggtggcgataaccaagaagtagtggcccgt
accttcttaattagaacaaaaacagaggatgaccgaaacaaactggtaacagcaatccaa
gagtatgcaccggcgtcgtaa
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