Gossypium hirsutum (upland cotton): 107929308
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Entry
107929308 CDS
T04793
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107929308
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
107929308
Peptidases and inhibitors [BR:
ghi01002
]
Serine peptidases
Family S54: Rhomboid family
107929308
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
Motif
Other DBs
NCBI-GeneID:
107929308
NCBI-ProteinID:
XP_040946428
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All DBs
Position
D03:51793210..51796079
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AA seq
328 aa
AA seq
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MASGDLERGGGSNVKNRGNSYNQSSSSSYYVENNEKQWTSWLVPMFVVANVAVFVVVMYV
NNCPRNNQGFEGGCVARFLGRLSFEPLKENPLFGPSSNTLEKLGALNWDKVVHGNQAWRL
ITCIWLHAGVIHLLANMLSLIFIGIRLEQQFGFIRVGLIYLLSGFGGSVLSSLFIQRSIS
VGASGALFGLLGAMLSELLTNWTIYTNKAAALITLMVIIVINLAVGILPHVDNFAHIGGF
LTGFLLGFVLLLRPQFGWVGRKHLPAGARVTSKHKAYQYLFLVIAMVLLIVGFTVGLVML
FRGENGHDHCSWCHYLSCVPTSKWHCGN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggggatcttgaaagaggaggaggaagtaatgtgaagaacagggggaatagc
tataaccaatcatcttcttcttcatactacgtggaaaataatgaaaaacaatggacttca
tggcttgttccaatgtttgtagtggctaatgttgctgtttttgttgtggtgatgtatgtt
aataactgtcctaggaacaatcagggatttgaaggtggttgtgtggctaggttccttggc
aggctttcttttgaacctttgaaagaaaatcctctctttggtccttcttctaatacattg
gaaaaattgggagccttaaactgggacaaggtagtgcatggcaatcaagcgtggagactt
atcacttgcatctggctgcacgctggtgttattcatctgcttgcaaacatgttgagcttg
atcttcattggaattcgccttgagcaacaatttggattcatacgtgttgggcttatctat
ctattgtccggttttggtggtagcgtactatcgtctcttttcattcaacgtagcatttct
gttggtgcctctggtgctttatttggccttcttggagcaatgttgtcggagctgctgact
aattggactatctatacaaataaggctgcagctctgatcacactcatggtcatcattgtc
attaacttagcagtggggattcttcctcacgtcgacaactttgcgcatattggaggtttc
ttaaccggttttctcctcgggttcgttttgctgcttcgtccccaattcgggtgggtggga
cgtaaacatcttcctgccggtgctcgtgtaacatctaagcataaggcataccaataccta
tttttggtgatcgctatggttttactcattgttggtttcacagtggggttggtaatgctg
tttagaggagagaatggacatgaccattgcagctggtgccattacctgagctgtgttcct
acatcaaaatggcactgtgggaactaa
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