Gossypium hirsutum (upland cotton): 107929397 Help Entry 107929397         CDS       T04793                                  Name (RefSeq) splicing factor 3B subunit 1   KO K12828   splicing factor 3B subunit 1 Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi03040   Spliceosome Brite KEGG Orthology (KO) [BR:ghi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107929397  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ghi03041]     107929397    03036 Chromosome and associated proteins [BR:ghi03036]     107929397 Spliceosome [BR:ghi03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     107929397  Complex B     107929397  Complex C    U2 SnRNP specific factors     107929397 Chromosome and associated proteins [BR:ghi03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     107929397 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N Motif Other DBs NCBI-GeneID:  107929397 NCBI-ProteinID:  XP_016716296 UniProt:  A0A1U8LSB0 LinkDB All DBs Position D12:2008138..2012450 Genome browser AA seq 1269 aa AA seqDB search MDIDNEIAKTQEERRRKEEELASLTSLTFDRDLYGGTDRDAYVTSIPVNDEDDANLDSMD SEVARKLASYTAPKSLLKEMPRGEDDDNALGFRKPAKIIDREDEYRRRRLNQVISPDRHD AFAAGEKTPDPSVRTYADVMREQALAREKEETLRAIAKKKKEEEEAAKVEKESGGAAAAV PKRRNRWDQSQDDGSAAAKKAKTTSDWDLPDATPGIGRWDATPTPGRVSDATPSVGRRNR WDETPTPGRLADSDATPAGGVTPGATPAGVTWDATPKGLVTPTPKRQRSRWDETPATMGS ATPMAGATPAVPLTPGVTPFGGTDLQTPTPSNLRGPMTPEQYNLLRWEKDIEERNRPLTD EELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEA PGGLPFMKPEDYQYFGSLLNEENEEELTPEEQKERKIMKLLLKVKNGTPPQRKTALRQLT DKAREFGANALFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEP LLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALG IPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLKSLVEIIEHGLNDENQK VRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAI YASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRNDILPEFFRNFWV RRMALDRRNYRQLVETTVEMANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLG ASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWR LNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKA IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRIC FELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIV AETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMD RDLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVINAVMEAIEGMRV ALGAAIVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPILEDEQSSEQNNIY SRPELMMFV NT seq 3810 nt NT seq  +upstreamnt  +downstreamnt atggatattgataacgagatcgcgaaaacccaagaggagcgaaggagaaaggaggaggaa ctcgcctcgcttacctcccttactttcgaccgtgatctttacggcggaacagacagggat gcttacgttacttctatccctgtcaacgatgaagacgatgccaatcttgattccatggat tccgaggttgctcggaagctcgcttcttacacggctcctaaatcactcctcaaagagatg cctcgcggtgaagatgatgataacgcgctggggtttaggaagccagcgaaaattattgac cgtgaagatgagtataggaggaggaggttgaaccaagttatttctcctgatagacacgat gcgtttgccgccggggagaagaccccggatccctctgtgaggacttacgcggatgtaatg agagagcaggcgctggcgagggagaaggaagagactttgagagctatagcgaagaagaag aaggaggaagaggaggctgctaaggtagagaaagagagcggtggggcagctgctgcggtg cctaagaggaggaatagatgggaccagtctcaagacgacggtagtgctgcagcaaagaag gctaaaacgacgtcagattgggatttgcctgatgctactcctggtattgggcgttgggat gctactcctacgccagggagagtttctgatgccaccccatcagttgggaggagaaataga tgggatgagacaccaacacctgggcggttggctgattccgatgcaaccccagcaggtgga gttactccaggggccaccccagctggggttacatgggatgctactccaaagggattggtt actcccacgccgaaacggcagagatctaggtgggatgagactcctgcaaccatgggaagt gcgactccaatggcaggggctacaccagcggttcctcttacacctggggttactcctttt ggcggtactgatttgcagacaccaaccccaagtaatcttcgtgggcctatgactcctgag cagtataatttgttgaggtgggagaaggatattgaggagaggaataggccattgactgat gaggagcttgatgctatgttcccacaagaaggttataagattttggagccacctgcttct tatgtgcctattaggacacctgctcgaaagcttcttgctactccaactcctatgggaact ccactttatgctattcctgaggagaatcgtgggcagcaatttgatgtgccaaaggaggca cctggtggattgccatttatgaagccggaggattatcagtattttgggtcattgttgaat gaggaaaatgaggaggaattgacaccagaagagcagaaggaacggaagattatgaaactt ctgttgaaggtaaagaatggaacaccgccacagaggaaaactgccttgaggcagctcact gataaggcaagggaatttggtgctaatgcattgtttaacaggattcttccgttgcttatg caacctacattggaagatcaagagaggcatctcttggttaaggttattgacagggttcta tataaattggatgagttggttaggccttatgtgcacaagattcttgttgttattgaaccc ttgttgattgatgaagattattatgctcgtgtggagggtagagagatcatttctaatctc agtaaggcagctggtttggctactatgattgctgcaatgcgtcctgatattgacaacatt gatgaatatgttaggaatacaactgctagagcttttagtgttgttgcttctgctcttggg attcctgcacttctaccatttttaaaagctgtgtgtcagagtaagaagtcatggcaagct aggcatactgggatcaagattgttcagcagattgctattttgattggttgtgctgttctt cctcacttgaagtctctagtagaaatcatagaacatggtttgaatgatgagaatcagaag gtgaggacaatcactgctttatctttggctgcccttgctgaggctgctgccccttatggt attgagagctttgactcagtgttaaaacctttgtggaaaggtatcaggtctcaccggggt aaagtattggctgcttttttaaaggccattggttttatcattcctttgatggatgcaatt tatgctagttactatacgaaagaagttatgtttatccttatccgagaattccagtctcct gatgaagaaatgaagaaaattgtgctaaaggtggtcaagcaatgtgttagcacggagggt gtcgaagctgagtatattaggaatgatatcctacctgagttctttaggaatttctgggtg agaaggatggctttagataggagaaattataggcagcttgtcgagacaactgttgagatg gcaaataaagtaggtgttgctgatattgtagggagaatagtagaggatcttaaggatgag agtgaaccttacaggcgtatggtaatggaaacaattgagaaggtggttgcaaacttgggt gcatctgacattgatgccaggttggaggaactcttgattgatggtattctttatgctttc caagagcagaccagtgatgatgccaatgtaatgcttaatggttttggtgctgttgtgaat tcacttgggcagagggtgaagccttatcttccccagatctgtggtacaataaaatggcgc ttgaataacaagagtgccaaggtcaggcagcaagcagctgatcttatttcaagaattgca gtggttatgaaacaatgtcaagaggaacaattgatgggccatctaggggttgttctatat gagtatctgggtgaggagtaccctgaagttttgggatctattttaggtgccctcaaggca attgtcaatgtcattggtatgactaaaatgacccctccaatcaaggatttgcttccaagg ttgacaccgattctgaaaaatagacatgagaaggtccaggagaactgtattgatcttgtt ggccgtatcgctgatcgaggtgcagagtttgtaccagctagggagtggatgaggatttgt tttgagcttcttgagatgcttaaagctcacaagaagggtattcgaagagctactgtcaat acctttggatatattgctaaagccattggcccacaagatgtcctggcaactctattgaac aatctcaaagtgcaggaacgccagaaccgtgtttgcacaactgtggctatcgcaattgtt gctgaaacatgttcaccttttacagttttgccagcattgatgaatgagtaccgtgtgcca gaacttaatgtgcagaatggtgtcttgaagtctctttccttcctttttgagtatattggt gaaatgggaaaggattacatctatgctgtgactccattacttgaggatgctcttatggat agagatttggttcacaggcaaactgcagcttcagctgtcaagcacatggctttgggtgtt gccgggttaggttgtgaggatgctttagtccacttgatgaactatgtctggcccaacata tttgagacttcacctcacgtaatcaatgctgtaatggaagccatcgaagggatgagggta gccttaggtgctgcaattgtgctgaactactgtctccagggactctttcatcctgcgcgt aaggttagggaagtgtattggaagatttataattcactctatattggatcccaagatgct ctagttgcagcgtatcctattctagaggacgagcagagtagcgagcagaacaacatatac agtaggcccgagttaatgatgttcgtataa

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