Gossypium hirsutum (upland cotton): 107929437
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Entry
107929437 CDS
T04793
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00270
Cysteine and methionine metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
107929437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107929437
03032 DNA replication proteins [BR:
ghi03032
]
107929437
03036 Chromosome and associated proteins [BR:
ghi03036
]
107929437
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ghi02048
]
107929437
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
107929437
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107929437
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
107929437
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107929437
Prokaryotic defense system [BR:
ghi02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
107929437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
107929437
NCBI-ProteinID:
XP_040930344
LinkDB
All DBs
Position
A08:complement(110977195..110988525)
Genome browser
AA seq
1205 aa
AA seq
DB search
MEPTENSDSDSKSQSLTLVTTGDDNVEQPLPLEICVPEEIAAGADDNKLLPRRSPSIFQL
FPIRSVFSRKSDIETVLKRCLRRSPRNSALVVRESANVRPKAIVSLETEGYKRKIKESTT
VEGKNLRRSPRFTTISAAAENKKVLSLSSKSRSSKSQRFKLKNKGAKIMNIERTNGMGLR
RSPRLTSAPPETKGRSSKTIFKSSDKGSYSETRSSGKLNGKRLCLSKTEEADKGTFPLRR
NETNLRLIIERQLRRSLKFSQATKNGSSDIPVRRLDMDEVVFSEEKLLGISPSSMHATEN
GGSNASFREHRREISDEKQFSTLLAEGDSAEVNSSSNRLSNSCDEQPSKKFKISSAESDI
GTSDETFSKKAKGSSLSGKKKSQSKTDVIFIGNPIPDDKAQERWRWRYEMKNAKSNRKLI
SSDDDDDDDEDKVVWNVECHYAQAEIDGCTINLGDCVYIKGEEAKHHIGKILEFFKTTDG
ENYFRVQWFYRAEDTVSTEIKISFRSCTISYPDLCCFCSAHHAKVMKQEAAFHDERRLFY
STVMNDNPIDCIISKVSVTQISPKLGLKSNSLPRSDFYFDMEYCVDYSTFRNLPPDNSFK
SYSSSNCCKEVFPSTPAFSANIPSFGTYQAALTLLDLYSGCGGMSTGLCLGAKASSIDLV
TKWAVDSDKSASKSLKLNHPEAHVRNEAADDFLRLLKEWEKLCKRYVVDNLERTYPSRSR
ASEAVMKNASPAKDADASADELEVSGLVDVCYGDPCNTGNRGLKFKVRWKGYGASDDTWE
PIEGLSNCQECIQEFVIKGFRSKILPLRGDVDVICGGPPCQGISGYNRFRNVDSPLDDER
NRQIVVFMDIVEYLKPKFVLMENVVDILRLDKGSLGRYALSRLVHMKYQARLGIIAAGCY
GLPQFRLRVFLWGAHPSERLPQFPLPTHDVIIRYWPPPEFERNTVAYEEGQPRQLEDALL
LRDAISDLPPVSNNEVREEMTYEKPPETDFQRYIRSSKYVMTGSALDGATRIKNLLSDHR
PALLSEDDYTRVCLIPKRKGANFRDLPGVIVGADNVARRDPTREKQFLPSGKPFVPEYVF
TFEQGKSKRPFARLWWDETVPTVVTYPYCHSQVILHPEQDRVLTVRECARLQGFPDYYRF
CGTIKDRYCQIGNAVAIPVGRALGYTMGMAFQKGSGNEPLMILPPKFSLSTNIQLAKSLS
QSTDD
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggagccaacagaaaattccgactctgattccaaatctcagtctcttactttggtcaca
accggagacgataatgtggagcagccattgcctctagagatttgcgtcccggaagaaatt
gccgccggcgccgatgataacaagcttctaccgagaagatcccccagtatctttcagtta
tttccaattcggagtgttttttcgaggaaatccgatatagaaacggtgcttaagagatgc
ctgagaaggtcccccagaaattcagcgttggtcgttagggagagcgcaaatgtgaggccc
aaggccattgtgagtttagaaactgaaggttataaaaggaaaattaaggaaagtacgact
gtagagggtaagaatcttagaaggtcgccaagatttactaccatttcagctgccgctgaa
aataaaaaagtcctctctctttcctcgaagagtcgaagctcaaaaagtcaacggttcaag
ttaaaaaataaaggggcaaaaatcatgaatattgaaagaaccaatggaatggggttgagg
agatctccacgattgacttcggccccacctgaaaccaaaggtcgctcatcaaaaactatt
tttaaatcctctgacaaaggttcctactctgaaacaagatcttctggaaagttgaacggc
aagcgattatgtctctcaaagaccgaggaagcggataaaggaacttttcctttaaggcgt
aatgagacaaacttaaggcttattattgaaaggcagttaagaagatctctgaaatttagc
caggctactaaaaatggtagcagtgatatccctgttagaagattggatatggatgaagtg
gtcttttctgaagagaagctcttgggaatttctcccagttccatgcacgcaacagaaaat
ggcggcagtaatgcatcttttagagaacataggagggaaatttctgatgaaaagcagttt
tctacattattggctgaaggtgatagtgccgaagtaaactcttcttccaatagattatcc
aattcatgtgatgaacagccttccaagaaatttaagatctcatcagcagaatcagatatt
ggaacctcagatgaaacattctcaaagaaagccaagggctcgtctctttcaggaaagaag
aagagccaatccaagactgatgttatatttataggcaatccaatcccggatgacaaagct
caagaaaggtggcgttggcgatatgaaatgaagaatgcaaaatctaacagaaaactcatc
tcatcggatgatgatgatgatgatgatgaagacaaggtagtttggaatgtggaatgccat
tatgctcaagctgaaattgatggatgtaccataaatcttggtgattgtgtttatattaag
ggtgaagaagcaaaacaccacattggcaagatattagaattttttaaaacaacagatgga
gaaaattattttagagtccagtggttttatagagctgaagatacagtaagtacagaaatt
aagatttcttttagatcatgcactatttcttatcctgacctttgttgcttctgttctgca
catcatgcaaaggttatgaaacaagaggctgcttttcatgatgaaagacgtctattttat
tcaactgtaatgaatgataatcccatagattgcattatttcaaaagttagtgttactcaa
atatcacctaagttaggtttaaaatcaaattctcttccccgatctgatttctattttgac
atggagtattgtgtggattattcaacattccgcaacttgccaccagataattctttcaag
agctacagttcctcaaattgctgcaaggaagttttcccttcgactcctgccttttcagct
aatattcctagttttggaacttaccaggcagcactcacactactagatctttactctggt
tgtggcggaatgtcaactggtttatgccttggtgcaaaagcatcttccattgatctagtg
acgaaatgggcagttgacagtgataagtcagcaagtaaaagcttgaaattaaatcatcca
gaggcacatgtcaggaatgaagctgctgatgactttcttcgactactgaaggaatgggaa
aagctttgcaaacgatatgttgttgacaatttagaaagaacatatccgtcaagatccaga
gcctcagaagcagtcatgaagaatgcaagccctgcaaaagatgctgatgcctctgctgat
gagctcgaggtctctggtcttgttgatgtttgttatggtgatccttgcaacacaggcaac
cgtggactaaagtttaaggtccgctggaagggatatggcgcaagtgatgatacgtgggaa
ccaattgaaggcttaagcaattgtcaagaatgtattcaggaatttgtaataaaaggattc
aggtccaagatcttaccccttcgtggggatgttgatgttatttgtggtggccctccgtgc
caagggataagtggctataatcgctttagaaatgttgattctccattggatgatgaaaga
aatcgtcaaatagtggtcttcatggacatagttgaatacttaaaacctaagttcgttttg
atggaaaatgtggttgatattttgagacttgataagggttctcttggaagatatgcttta
agtcggttggtacatatgaaataccaagcaaggcttggaataattgcagctggttgttat
ggtcttcctcaattccggttgcgtgtttttttgtggggagcacatcctagtgagaggctt
ccacagtttccacttcctactcatgatgttattatcagatattggcctcctcctgagttt
gagcgcaatacagttgcttatgaagaaggccaacctcgtcaacttgaagacgctcttctt
ctccgtgatgccatttctgatctcccacctgtttcgaataatgaagttcgcgaagaaatg
acatatgaaaagcctcctgaaacggactttcaaagatatataagatctagtaaatatgtg
atgactggttctgcattagatggtgccacaagaataaagaacctattgtctgaccatcgg
cctgctcttttatctgaggatgattatacaagagtttgtctgattccaaagagaaagggg
gcaaattttcgagacctccccggtgtaattgttggagcagacaatgtggctcggagggat
ccaacacgggaaaagcagtttttaccttctggaaaaccatttgtaccagaatatgtattt
acctttgaacaaggaaaatctaaaagaccatttgctagattatggtgggatgagactgtg
ccaactgttgtaacttatccttattgtcacagccaggtaatattacatccagagcaagac
cgagttctcacagtccgggaatgtgcaagattacaaggttttcccgattattatagattc
tgcgggacaattaaagataggtattgtcaaattgggaatgcggttgcaattccggttggt
cgagccttgggatacacaatgggaatggcatttcagaaaggaagcgggaatgaaccactg
atgatccttcctcctaagttttctctttccaccaatatccagttagcaaaatcattgtcc
caaagcactgatgattga
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