Gossypium hirsutum (upland cotton): 107929486
Help
Entry
107929486 CDS
T04793
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107929486
Transcription machinery [BR:
ghi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107929486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
DUF6697
Motif
Other DBs
NCBI-GeneID:
107929486
NCBI-ProteinID:
XP_016716409
UniProt:
A0A1U8LP99
LinkDB
All DBs
Position
A12:complement(106919994..106923274)
Genome browser
AA seq
516 aa
AA seq
DB search
MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIMAFKADKFNNTALVTLRDHNLLPVETA
KEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGSE
GETKGRHLRGKRSTESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQ
SKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMKALLEA
KENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFQD
FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG
LESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVVSLHLRHSVTQ
EEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
SGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtcagtgtttctagttcagctgcccgaactccagtaggattaggcacaaag
ttttctactcaaagatgtacatttagaagaccttgtattatggcatttaaagcagacaaa
tttaataatacggctctagttacgcttcgagaccataatcttttgccggtggaaacggct
aaggagcacccgaagagacgcgggaaagcgaaaaaggcttccaagactgtaaaccgtgac
tttactgatgaaggttctccgtacaccgtggacgtagattacaacgaagccgctgccaaa
ctcgaaaacatttataagcttagcccttcgactcaaacatttgatgaaaaagggagtgaa
ggtgagacaaaaggacgccatctgagggggaagagatctacagaaagtgatgggaaagcg
gataacggtgatgataagatcgtggttcggagccagactaagaagaacagaagattgggc
cttgataaaaggattgaactgaaaaagaatagagaagaaaagtcggttgtttctggccag
agtaaaaagggtatctcgaatgaaagtgagaagatcgataggcttgtccgggactattcg
gcttcaaccgatttggtcagcctggactggaagaaaatgaagatacctccggttctgccg
tccaccgaacatacttggttgtttaagctaatgcagccaatgaaggcactgcttgaggca
aaagagaacttgcaaaaggatctgggtagagatcctactgaagatgaattagctgaggca
acaaattcgagtgcagctcaagtgagaagacagttagaggttggtcgagctgctagaaat
aagctcattaagcacaacctccggctcgttttgtttgtgataaacaaatattttcaagat
tttgcaaatggtccaagatttcaagacctttgtcaggctggagttaaaggacttatcaca
gccatcgaccgctttgaaccaagaaggagattccgtctttctacatacggccttttttgg
attaggcatgcaattatacgttccatgaccctatcaagcttcacgcgtgtctcatttgga
cttgaatcagttagagtagaaatccaaagagccaaactggaattattgtttgaacttcat
agagaaccgacagacgatgaagtaatcaaaagagttgggatttcccccgagaggtaccaa
gaagtaatgagggcctcgaaacccgttgtatctcttcatttgaggcattccgtcacacaa
gaagagttcattagtggaatcaccgatgtcgatggtgttggaggcgatcaccgaaggcaa
cctgctcttctcaggcttgcacttgatgatgtgctcgattctctgaagccaaaagagagc
ctggtaatcaggcagagatacggactcgacggtaaaggtgatagaacattaggagaaatt
tctgggaacttaaacatttcgagagaaatggtccgaaagcacgaagtaaaggcacttatg
aagctcaagcatccagcccgagttgattatctccgccgatacgtcgtctga
DBGET
integrated database retrieval system
