Gossypium hirsutum (upland cotton): 107929595
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Entry
107929595 CDS
T04793
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107929595
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107929595
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
107929595
NCBI-ProteinID:
XP_016716562
UniProt:
A0A1U8LT24
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All DBs
Position
A12:complement(106904663..106909783)
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AA seq
438 aa
AA seq
DB search
MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADIAGNVLLVTIEGQ
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKNALDGRIIPRYL
LSENISPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDGSNQFNLGVDGKKLE
PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGALQALIQYPDVQTAIVAK
EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNPAMVNPQPSVLGQQPVQT
MGHQYNGTQYAPGRQQQQPTMPPQPSAGWGSSAVPLMPQPMMNNHNPYIPPASMPQMTQG
MMQMPGQGGIPPFRPTHM
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtatcaagtcagccgcagttccgctacactcaaccaccgtcgaaggtgctg
catttaagaaacttgccatgggagtgtacggaggaagagctgattgagctggggaagcca
tttggtaaggtcgttaataccaaatgcaatgttggcgccaatcgaaatcaagctttcata
gaatttgctgatttgaatcaggctattgctatgatatcatattatgcttcatcttcggag
cctgctcaagttaggggcaaaacggtctacctacaatattctaacaggcaagagattgta
aacaacaaaaccacggcggatatcgccggaaatgttcttttggtaacaatcgaaggtcaa
gatgcgcggcttgtttccattgatgttttgcatctggtattttcagcttttggatttgtg
cataagattactacctttgagaagacagctggatttcaggcattggtgcagttttcagat
gcagaaacagccacatctgcaaaaaatgccttggatggacgaatcatccctaggtatctg
ctttctgaaaacatatctccttgtacgcttaggatcacatattctgctcatacagatttg
agtgtgaaatttcagagccacaggagcagggactataccaatccctatcttcctgttgct
ccttctgctatagatggaagtaaccagttcaatttgggtgttgatgggaaaaagctagaa
cctgaaagtaatgttttacttgcatctattgagaacatgcaatatgctgttaccttggat
gtgctgcacatggtcttctctgcttttggccctgttcaaaagattgccatgtttgataag
aatggtgccctgcaggctctaattcagtaccctgatgttcagacagctattgttgccaag
gaggcattagaagggcactgcatatacgatggagggttttgtaaacttcatctctcgtat
tcacgtcacaccgatcttagtataaaggtcaataacgataggagcagggattatacaatc
cctaatcctgctatggtgaacccacagccttcagttctggggcaacaaccagttcaaaca
atgggtcatcaatacaatgggacacaatacgctccgggtagacaacaacaacaacctaca
atgcctccacaaccttcagctggatgggggtcatcggctgttccactgatgccccaacct
atgatgaataatcataatccttacataccaccagcctcaatgccgcaaatgactcaggga
atgatgcaaatgccaggccagggtggcatacctcctttcagacccactcatatgtaa
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