Gossypium hirsutum (upland cotton): 107929598
Help
Entry
107929598 CDS
T04793
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107929598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107929598
03036 Chromosome and associated proteins [BR:
ghi03036
]
107929598
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107929598
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107929598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
107929598
NCBI-ProteinID:
XP_016716568
UniProt:
A0A1U8LT27
LinkDB
All DBs
Position
A12:106151260..106154822
Genome browser
AA seq
577 aa
AA seq
DB search
MFGATSQKVHPDNALFCAHLHPSLFLGRPTMQVAISLHLNLPLVVQPPFAFQTGSSIFGG
SSTEVFGAAQFSSPFLSTTAFGASSSPAFGSYMPAFGSSSSPAFGSSSASFGGSSVFGQK
PAFGFGSTPTQSSPFGITACIWFPDTISQSAFGSSTSAFAAASTPAFGVTSTPAFGSTGS
SAFGSTGTAFGVSNSPVFGTVGTFGASSAPAFGTSLTHAFGASNSAFGTSKTPVFGVSSS
AFGVSDTPFGSSSTPSFSSGSSPAFGQSTPAFASSPFGTTTIGAQGSFGPRCSAPAFGQS
TFGAQRGGSRVASYPPTIDADSSIGTQPAEKLESISAMPVYKDKSHEELRWEDYQLGDKV
GLQPTARPPGGICFGVSTAPTSHCGSSPTFGQTSANPHSITSTNPFSLKSPSFSSVGFAT
STTTSNPSQSTSSSLFDPISSTTSVFISPLTPTFGTGSSLFSSSVTPSFPSSPSIFGTAA
VPATMPAFATGLNFSSSQASPLFNSTPAIGQVTSTFGQNTGSFDQTSILNTPSTGFCGNM
FSSPLLLAPANNPAAFGPATASRSGNLYYHSSFLSYL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcaactagccaaaaagtgcatcctgataatgctttgttctgtgcccatttg
catcccagtctgtttttggggagaccaacaatgcaagtagcaatcagtttgcacctaaac
cttcctttggtagtccaacccccttttgctttccaaacagggagttcaatatttgggggt
tcttctactgaagtgtttggtgcagcccagttttcttctccctttttgtcaaccacagcc
ttcggtgcctcttcatctccggcttttggaagttatatgcctgcttttggatcttcttct
tctcctgcttttggcagctcatcagcatcttttggtggatcttctgtttttggtcagaag
ccggcatttggctttgggtctactcccactcaatcaagtccttttggaatcacagcctgc
atttggttccccgataccatttcccagtctgcattcggttccagtacttctgccttcgct
gctgcaagcactcctgccttcggtgtcacaagcactcctgccttcggttcaactggaagt
tcagcatttgggagcactggaactgcatttggtgtgtctaattccccggtatttggaaca
gtaggcacatttggagcatcaagcgcaccagcttttggcacttctctcactcatgctttt
ggagcatccaattctgcttttggcacttccaagactcctgtttttggagtgtcaagttct
gcttttggcgtttccgacactccttttggatcatcttctactccttcattcagctctggg
tctagccctgcttttggccaatcaacaccagcatttgccagtagtccttttggaacaact
acaattggagcacagggttcttttggaccccgatgttctgcaccagcatttggacagtca
acttttggggctcaacgtgggggaagtagagttgcttcttacccacctacaattgacgct
gatagtagcattggtacacagcctgctgagaagttggagtcaatttcagctatgcctgtt
tacaaagataaaagtcatgaggagctgagatgggaggattatcaattaggagataaagtt
ggactgcagccaaccgcgcggcctcctggagggatttgctttggtgtgtcaactgcacct
acaagtcattgtggttcttctccaacatttggccaaacatctgcaaatcctcattccatc
acaagtaccaatccatttagtctaaaatctccatccttcagcagtgtaggctttgcaacc
tcgactactacctcaaacccttcccaatcaacatcatcaagcctttttgacccaatttcc
tcaacaacttcagtatttatttcacctttgactcctacatttggaactggttcatctctt
tttagttcatctgtcactccttcatttccatcttcaccatctatttttggtactgctgca
gttcctgcaacaatgccagcatttgctaccggtttaaattttagcagcagccaagcatcc
cctttgttcaattctacccctgcaattgggcaggtgacctctacttttggacagaatact
ggtagctttgaccaaacaagcattttaaacacaccttcaactgggttttgcgggaatatg
ttttctagccctctactgttggctcctgctaacaacccagctgcctttggcccggcaact
gcaagtcgctcaggaaatctttactatcattcttcctttttatcatacttatga
DBGET
integrated database retrieval system
