Gossypium hirsutum (upland cotton): 107929756
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Entry
107929756 CDS
T04793
Name
(RefSeq) (+)-delta-cadinene synthase isozyme A-like isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
107929756
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
107929756
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Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Motif
Other DBs
NCBI-GeneID:
107929756
NCBI-ProteinID:
XP_040960743
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Position
D11:63401983..63405245
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AA seq
560 aa
AA seq
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MSSQISSNLVPSHDGNTSKENRHLANFRPSFWGDIFLSSTSEMELDAGTQQEYEELKQEV
RRMLVVNMDKSFQKLHIIDAVQRLGVAYHFEKEIEEALQIIYHHHCNHIEVDGDDLYTTA
VRFRLLREHGFDVHCAETFNKFKDEKGNFKESLIGDVKGMLELYEAAHFQLHGENILEEA
LSFTTFHLKLVETTVDYPLSTQIANALKRPLRKSLPRLIARSYISIYEAYGAQDENLMKF
AKLDFKILQHLHKMEINKINRWWKGLDVATNFPFIRDRCVECYFWMLGVYFEPHYAIART
FVTKVTCLVSILDDIYDAYGTYEELEIFTKAIQRWDTSCIDQLPNYMKLWYSETLNVYKD
MEDLMSKEGKAYRVQLAIEAMKRQSQVYFVEAKWLHENYIPTMEEYMPIALVSCGYWFIT
ISSFVGMEESITKETFNWAFNDPKIIRASSIICRLMSDIVGHKVEQERGHVSSAVECYMK
QYGVSMQKAYDELYKQINNAWKDINEEFLKPTAAPTSALNRILNLARVIDLLYTGEDAYT
EVGESAKTSITALLIDTIPI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcaaatttcttcgaatcttgttccatctcatgatggtaacacgtccaaggaa
aatcgtcatttggccaactttagacctagcttttggggggacattttcctctcttctact
tctgaaatggaactggatgctggaactcaacaagagtacgaagaactgaagcaagaagtg
aggagaatgttagtggtaaatatggataaatcgttccaaaagttgcatataattgatgca
gtccaacgcttaggtgtggcttaccatttcgagaaagagatagaagaggccttgcaaatt
atataccatcatcattgcaatcatattgaggttgatggtgatgatctttacactactgct
gttcgatttcgcctgctaagagagcatggtttcgatgttcactgtgcagagacatttaac
aaattcaaagatgagaaaggaaatttcaaagaatctttaattggtgatgtgaaaggcatg
ctagaattgtatgaagctgcacactttcaactgcatggggaaaatatattagaagaagcc
ctttccttcactacatttcatctgaagttggtagaaactacggtagactatcctctctcc
acacaaattgctaatgctctaaagcgaccccttcgcaagagcttgccgaggttgattgct
aggagctacatttccatatatgaggcatacggtgcccaagatgaaaatttgatgaaattt
gcaaagttagatttcaaaatcttacaacatttacacaagatggagataaacaagataaac
aggtggtggaaaggtttagatgttgcaaccaattttccttttataagggatagatgtgtg
gaatgttatttttggatgttgggtgtatactttgaaccccactatgccattgctagaact
tttgtgaccaaagtgacatgcctcgtatcaattttggatgatatttatgatgcatatggc
acatatgaagaacttgaaatctttacaaaagcaatccaaaggtgggatactagctgcatt
gatcaacttccaaactacatgaaattgtggtatagtgaaaccttaaatgtttataaagat
atggaagatttgatgtccaaagaaggaaaagcatatcgagtccaactggccatagaagca
atgaaacgacaatctcaagtttactttgttgaggccaaatggttgcatgaaaattacata
ccaacaatggaggagtatatgccgattgcattagtttcctgtggttattggtttataacg
atttcatcttttgttggcatggaagagagcataacaaaagagacattcaattgggcattt
aatgaccctaagattatcagagcttcaagcattatttgtaggctgatgagtgatattgtt
ggccacaaggttgagcaagagagaggacatgtttcctcggcagtggagtgttacatgaaa
caatatggggtgtcaatgcaaaaggcatacgatgagttatacaagcaaataaacaatgct
tggaaggatataaatgaagagtttttgaaaccaacagcagcaccaacatcggctcttaat
cgaattctaaaccttgcaagggtcattgatctcctttacacgggcgaagatgcttatacg
gaagttggggagtcagcaaaaactagcatcactgctttgctgatagatacaatcccaatt
tga
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