Gossypium hirsutum (upland cotton): 107929796
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Entry
107929796 CDS
T04793
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107929796
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107929796
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_1
TPR_2
bL31_N
Motif
Other DBs
NCBI-GeneID:
107929796
NCBI-ProteinID:
XP_016716793
UniProt:
A0A1U8LTQ7
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Position
D11:complement(64220948..64231217)
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AA seq
1265 aa
AA seq
DB search
MANYLAQFQTIKSTCAHLIIAVEDVSDLWPAVRNNFEERLPFRRACLNNKTRNPVFLENL
PAEFVLTTDARLRSRFPQEQYLFWFREPYATLVLVTCEDLDEFKNIVKPRLKVFAQNDER
EWFIIFLSKAHPNNDQATKMAKKVYAKFEADFSSKKRERCCKFDIYGPEPNFWEELEFRI
MDSIKNTLDRRIQFYEDEIRKLSEQRFMPIWNFCNFFILKESLAFMFEIAHLHEDALREY
DELELCYLETVNMGGKHREFGGLDCGDDRAALLNPGNKSLTQIVQGDSFREFEFRQYLFA
CQSKLLFKLNHPFEVALRGYSFIISFSKALESNESILPFCMREVWVITACLALVDATSIQ
YNDEDVAPETEKEFYRVQGDLYSLCRIKLLRLAYLIGYGTEIERSPVNSASLSMLPWPKP
AVWPSVPDDATSEVVVKEKMILQETPRVKHFGIQRKPLPLEPTILVREANRRRSSLSVGN
SSEIFYGRVEFNDGLAADVPAKMPQADKAHEFMMSRTYSSPGNFDCSIGRPMRLAEIFVA
AERALKKTISNPDLQKILSSVENFEQKYMELTKGAADNYHHSWWKRYGVVLDGEIAAVCF
KRGNFDLAAKSYEKVCALYAGEGWEDLLAEVLPSLAECQKSLNDEAGYLLSCVRLLSLDK
GLFLSKERQAFQSEVVSLAHNEMTNHVPLDVSSLITFSGNPGPPMALCDGDTGTLSVTVW
SGFPDDITLDSLTLTLMATYNADEGGKLRNSNATVLKPGRNTITFPLPPQKPGSYVLGVL
TGHIGQLTFRSHSFSKGGPADSDDFMSYEKPTRPILKVFKPRPLADLSASISSALLINET
QWIGIIAQPINYSLKGAVLHIDTGPGLMIEESHSIEMESNKKAGHGSVGTANSGDATKDS
SVAAKDCSPAADKHFEQLCLVSGKIEFPDWASDVSSILWIPTRAIDDKLARGSSSGAPEK
QSIVDRMRTIALKLEFGISKNQIYDTTIALHFSDPFHVSTRVADQCNDSTLLLQVTLHSQ
VNATLSVYDAWLDLHDGFTHAGQGNGRPISAFFPLVISPSSRAGLLFCLCLEKRTAEDEN
NVPPENILNIRYEIAGDRTIGAHPPVTMKSNENAEDTSKNLVFRSALVLQQPVLSPCLAV
GFLPLPSDSIRVGQLVTMKWRVERLKDIEEKRVPQNNDKMLYEINANSDKWMIAGRKRGH
VSLDMKQGSRIVISILCMPLVSGYIHPPHLGLPGIDEVSITCSPAGCHLVRVLPPAPSSS
FCVPA
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactatttagctcagtttcaaacaataaagagcacttgtgctcatctcatcatt
gctgttgaagatgtcagtgacttatggcctgccgtcaggaacaatttcgaggagaggctg
ccattcagaagagcttgcttgaataacaagacccgtaaccctgtgtttttggagaatttg
cctgctgaatttgtgttaaccactgatgcaagattacgtagcagatttcctcaagagcag
tacttattttggtttcgggagccatatgcaactctggttcttgttacatgtgaggacctt
gatgagttcaagaatattgttaaaccacgcctgaaagtgtttgctcaaaatgatgagcgg
gaatggtttattatatttttatctaaagctcatccaaacaatgatcaggccactaaaatg
gctaagaaagtatatgccaaatttgaagctgatttcagctccaagaagagggaaaggtgc
tgcaaatttgacatatatggtcctgaaccaaatttttgggaagagttagagttcaggatt
atggattctatcaaaaatacattggatagacgaatacaattctatgaggatgagatacgc
aagcttagtgaacaacgattcatgccgatttggaacttctgtaattttttcattctgaag
gaaagcttggcttttatgtttgagattgctcatcttcacgaggatgccttacgtgaatat
gatgaactagaattgtgctacttggaaacagttaatatgggtgggaaacatagggagttt
ggaggactagactgtggtgatgatcgggcagcactgctcaaccctggaaacaaatcattg
acgcagattgttcaaggtgactcattcagggaatttgaattcagacagtatctctttgct
tgtcaatcaaagctcttattcaaactgaatcatccttttgaggttgctttgaggggttat
tcatttataattagtttctcaaaagccttggaatcgaatgagagtattctgcccttctgt
atgcgtgaagtttgggtaatcactgcatgcttggctttagtcgatgcaaccagtattcaa
tataatgatgaagatgtagcccctgagacagaaaaggagttctatcgcgttcaaggtgac
ctttactcactatgtaggattaagttattgaggcttgcatatctaattggatatggaacc
gagatagaaaggagtcctgttaacagtgcttctctaagcatgctgccttggcccaagccg
gcagtttggccttcagttccagatgatgctacctctgaggtggttgtgaaagaaaagatg
atcctgcaagaaactcctagagtcaagcactttggcattcagaggaaacccttgccactg
gaacctactatccttgtacgtgaggcaaaccggcgaaggtcttcgctttctgttggaaac
tcatcagagattttttatggcagagtagagttcaatgatggattagctgcagatgtacca
gcaaagatgccccaggcagataaagctcatgaatttatgatgtcacgtacatactcatct
cctggaaatttcgattgctcgattggtcgacctatgagacttgctgaaatttttgttgct
gctgaacgtgctctgaagaaaacaatttcaaatcctgatctccagaaaattttgtcatct
gtagagaactttgagcaaaaatatatggagctcactaaaggtgctgctgacaattaccat
cattcttggtggaaaagatatggagttgtcctcgatggtgaaattgcagctgtctgcttt
aagcgtgggaactttgacctagctgcaaagtcatatgagaaggtttgtgccctttatgct
ggtgaaggatgggaagatttattagctgaagtcttgcccagtttagctgaatgtcaaaag
tcactcaatgatgaagctggctacctgttatcttgtgtgcgattgctttcgctagataaa
ggtttattcttatcgaaggaacgccaagcttttcaatcagaagttgttagtctagcacat
aatgaaatgacgaaccatgttcctcttgatgtatcatcgttaattacattttctggaaat
cctgggcctcctatggcgctatgtgatggggatactggtaccttatctgtgaccgtttgg
agtggatttcctgatgatataactctcgattctcttactctcactttgatggctacatat
aatgccgatgaaggtggtaagttacggaactctaatgccactgtactaaagcctggtagg
aatacaatcacatttcctttaccaccacagaagcctggttcctatgtcttgggagttctt
actggccacattggacagttgacattcagatctcatagtttttccaagggaggtccagca
gatagtgatgatttcatgagctatgagaagccaacccggcctatcttgaaggttttcaaa
ccaagacctctagctgatctgtctgcaagtatatcatctgccttactgattaatgaaact
cagtggattggaattatagcacagcctataaactactccttaaaaggtgctgtcttgcat
attgatactggtcctggtttaatgattgaagagtcacattccattgagatggagagcaac
aaaaaggctggacatggctcggttggtacggcaaactctggtgatgctacaaaagatagt
tctgtggctgcaaaagattgttctccagctgctgataaacactttgagcagttatgtctt
gtaagcggtaaaatagagtttccagattgggccagtgatgtatcctcaattttatggatt
cctactcgtgctattgatgataagcttgcaagagggtcatcttcaggggcccctgagaaa
caaagtattgtggacagaatgaggacaatagctttgaagcttgagtttgggatatcaaag
aaccagatctatgacacaaccatagctctgcatttcagtgatcctttccatgtgagcaca
agagtcgccgatcaatgcaatgatagtactttgcttttacaggtaacactacactcccaa
gtgaatgccacattgtctgtttacgatgcttggcttgaccttcatgatggatttacacat
gctggacaaggtaatggaagacctatttctgcattctttccacttgtcatatctccaagt
tcaagagctggactcctcttctgtttatgcttggagaagagaactgctgaagatgaaaat
aacgtaccaccagaaaacatattaaacataagatatgaaattgctggtgataggaccatt
ggggcacacccacctgtgactatgaaatcgaatgaaaatgctgaggatactagtaagaat
ttagtcttcaggagtgctcttgttctgcagcagcctgtccttagcccgtgcctggctgta
ggatttctacctcttccttccgatagtattcgagttgggcaacttgttaccatgaaatgg
agggttgaaaggttgaaagacattgaggagaaaagagttcctcaaaacaatgacaagatg
ttatatgaaatcaatgcaaattctgataaatggatgattgctgggaggaaaagagggcat
gtttctctcgacatgaagcaaggttcaaggatagttatttccatattatgcatgcccctt
gtttctggatacatccaccctcctcatcttgggcttccgggtatcgatgaagtgagtata
acctgcagtcctgccggatgtcacctggttcgcgtcttgcctcctgctcctagttcatcc
ttctgtgttccagcatga
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integrated database retrieval system
