Gossypium hirsutum (upland cotton): 107929876
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Entry
107929876 CDS
T04793
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107929876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107929876
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
107929876
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-RING_6
RNA_polI_A14
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
107929876
NCBI-ProteinID:
XP_016716898
UniProt:
A0A1U8LU02
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Position
A07:2302150..2305479
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AA seq
394 aa
AA seq
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MGSGRNDSPGSGNPGPSGESIPSPPMEPRRFPLAAQPEIMRAAEKDDQYASFVYDACRDA
FRHLFGTRVAVAYQNETKLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPHGLSPTPARR
ALFIVYQTAVPYIAERISSRIASRGITLADLQSDEFYSNSGSERSQVESSTGVEISLPSE
STASVSALSRLKEKLRGMWLRAVHRWPAVLPIAREFLQWVLRANLMFFYFEGFYYHISKR
AAGIRYVFIGKPSNQRPRYQILGIFLLIQLCIIAAEGLRRSNLSSITSSIHQTSLGSHQN
PTGQGLPLLNEEGNLIPMEADQGSWVGESTSESTGVVSKCTLCLSNRQHPTATPCGHVFC
WNCIMEWCNEKPECPLCRTPITHSSLVCLYHSDF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggatcggggagaaacgactcgcccgggtcaggcaacccaggtccaagtggggaatcg
attccctcccccccgatggagccacggcgattccctcttgcagctcaacccgagataatg
agagcggcggagaaagacgaccaatacgcttccttcgtctacgacgcctgccgcgacgcc
ttccgccatctttttggtaccagagttgcagtagcttatcagaacgagacaaaactccta
ggtcaaatgctttactatgttttaacaacaggttctgggcagcaaacattaggagaagaa
tactgtgatataactcaggttgctggacctcatggcctttccccaacacctgcgagacgt
gctctctttattgtgtatcagactgcagtaccttacattgccgaaagaattagctctaga
attgcatcccgtggtataacccttgctgatttgcagtctgatgagttctatagtaacagt
ggttctgagaggagtcaagtagagtcatccacaggcgttgaaatttcattaccctcagag
tctactgcatcagtatctgcactgtcgaggttgaaagagaaactgcgtggaatgtggtta
cgtgcagttcacagatggccagcagtgctgcctatagctcgtgaattcttgcaatgggtt
ctacgtgctaacctcatgttcttctactttgaaggtttctattatcatatatccaaacga
gcagctggtattcgctatgtgttcattgggaagccatcaaatcaaagacccaggtaccaa
atcctggggattttcctcttaattcagctatgcatcattgctgctgaaggtctgcggcgc
agcaacttatcttcaattacaagttcaattcatcaaacctcattagggtctcatcagaat
ccaacaggacaaggtttacctctgttaaatgaagaaggcaacttgataccaatggaggct
gaccagggtagctgggttggtgaatcaacttcagagtcaacaggtgttgtcagcaaatgc
accttatgtctaagtaatcgacaacacccgacggctacaccatgcggtcatgtattctgc
tggaactgcatcatggaatggtgcaacgagaaacctgaatgcccactttgccgcactccc
ataacacattcgagtctagtttgtttatatcattcagacttttag
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