KEGG   Gossypium hirsutum (upland cotton): 107929876
Entry
107929876         CDS       T04793                                 
Name
(RefSeq) peroxisome biogenesis factor 10
  KO
K13346  peroxin-10
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    107929876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107929876
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    107929876
SSDB
Motif
Pfam: Pex2_Pex12 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-rbx1 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 Prok-RING_4 zf-RING_6 RNA_polI_A14 zf-RING_10
Other DBs
NCBI-GeneID: 107929876
NCBI-ProteinID: XP_016716898
UniProt: A0A1U8LU02
LinkDB
Position
A07:2302150..2305479
AA seq 394 aa
MGSGRNDSPGSGNPGPSGESIPSPPMEPRRFPLAAQPEIMRAAEKDDQYASFVYDACRDA
FRHLFGTRVAVAYQNETKLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPHGLSPTPARR
ALFIVYQTAVPYIAERISSRIASRGITLADLQSDEFYSNSGSERSQVESSTGVEISLPSE
STASVSALSRLKEKLRGMWLRAVHRWPAVLPIAREFLQWVLRANLMFFYFEGFYYHISKR
AAGIRYVFIGKPSNQRPRYQILGIFLLIQLCIIAAEGLRRSNLSSITSSIHQTSLGSHQN
PTGQGLPLLNEEGNLIPMEADQGSWVGESTSESTGVVSKCTLCLSNRQHPTATPCGHVFC
WNCIMEWCNEKPECPLCRTPITHSSLVCLYHSDF
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgggatcggggagaaacgactcgcccgggtcaggcaacccaggtccaagtggggaatcg
attccctcccccccgatggagccacggcgattccctcttgcagctcaacccgagataatg
agagcggcggagaaagacgaccaatacgcttccttcgtctacgacgcctgccgcgacgcc
ttccgccatctttttggtaccagagttgcagtagcttatcagaacgagacaaaactccta
ggtcaaatgctttactatgttttaacaacaggttctgggcagcaaacattaggagaagaa
tactgtgatataactcaggttgctggacctcatggcctttccccaacacctgcgagacgt
gctctctttattgtgtatcagactgcagtaccttacattgccgaaagaattagctctaga
attgcatcccgtggtataacccttgctgatttgcagtctgatgagttctatagtaacagt
ggttctgagaggagtcaagtagagtcatccacaggcgttgaaatttcattaccctcagag
tctactgcatcagtatctgcactgtcgaggttgaaagagaaactgcgtggaatgtggtta
cgtgcagttcacagatggccagcagtgctgcctatagctcgtgaattcttgcaatgggtt
ctacgtgctaacctcatgttcttctactttgaaggtttctattatcatatatccaaacga
gcagctggtattcgctatgtgttcattgggaagccatcaaatcaaagacccaggtaccaa
atcctggggattttcctcttaattcagctatgcatcattgctgctgaaggtctgcggcgc
agcaacttatcttcaattacaagttcaattcatcaaacctcattagggtctcatcagaat
ccaacaggacaaggtttacctctgttaaatgaagaaggcaacttgataccaatggaggct
gaccagggtagctgggttggtgaatcaacttcagagtcaacaggtgttgtcagcaaatgc
accttatgtctaagtaatcgacaacacccgacggctacaccatgcggtcatgtattctgc
tggaactgcatcatggaatggtgcaacgagaaacctgaatgcccactttgccgcactccc
ataacacattcgagtctagtttgtttatatcattcagacttttag

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