Gossypium hirsutum (upland cotton): 107929914
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Entry
107929914 CDS
T04793
Name
(RefSeq) auxin response factor 19
KO
K14486
auxin response factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107929914
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
107929914
NCBI-ProteinID:
XP_016716937
UniProt:
A0A1U8LQT7
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Position
A07:complement(1829380..1835829)
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AA seq
1121 aa
AA seq
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MKAPPNGFLANPAEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
TDFVPSYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYDREALLASDMGLKQSR
QPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHENPWTFRH
IYRGQPKRHLLTTGWSVFVSNKRLFAGDSVLFIRDEKSQFLLGIRRANRQQPALSSSVIS
SDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMF
ETEECGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPTRVSIWDIEPVVTP
FYICPPPFFRPRFPKQPGMPDNDNDVENAFKRAMPWLGDDFGMKDSPNSIFPGLSLVQWM
NMQQNNQFAAAQSGLFPSMVSSNPLHNSLGTDDPSKLLNFQAPVLPASNMQFNKANPNQV
NQLSQAPMTWPQQQQLQQLLQTPLNQNPQQQLQQRQSQLQPQSHLQQQPQPQPPLQQQQQ
QQQRQQAQPQPQPQQQQPPLQQLQQQQRQQAQPQLLQQQFLPAQVNNGITASNQMPNQNL
HQPGVYSQIQQQQQQQQILTSNGQSTQTTLPANKASYPLTSLAQDTQIQQQVEQQPNLVQ
SQQQQTQLQQNLSQRSQQQPQIQQLAQQGLSEQQFQLLQKLQQQQQSSQQLLSPTGSLSQ
SPVVQQQPMHQQNQPMQQVPLSQSQQTLGSNGFSTSMLMQPQQLVVSQSQNQNKPLMAMR
THSGLTDGDAPSCSTSPSTNNCQVSPSSFLSRSQQVPSMVVTDPVVEPASTLVQELQSKP
DIRIKHELLASKGPDQSKYKSTVTDQLEASSSGTSYCLDAGTIQHNFSLPTFLEGDVQSH
PRNNLQFSANIDGLAPDTLLSRGYDSQKDLQNLLSNYGSNPRDIDTELSTAAISPQSFGV
PNIPFKSGCSNDVAINDAGVLNGGLWANQTQRMRTYTKVQKRGSVGRSIDVTRCKGYDEL
RHDLARMFGIEGQMEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSLEVQ
QMSLDGDLGNVPVPNQACSEIDSGNAWRGHYDDTSAASFNR
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctccacccaatggatttttggcaaatcccgcagaaggagaaaggaagagtatc
aattcggaattatggcatgcttgtgctggaccacttgtttctttaccaccagttggaagt
ttggtggtttactttcctcaaggccatagtgaacaagttgcagcatcgatgcagaaggag
actgatttcgtaccaagctaccctaatcttccttccaagttaatttgcatgctccataat
gtcacattgcatgctgacccagaaaccgatgaggtctatgctcagatgactcttcaacct
gtaaacaaatatgacagagaagcattactagcatctgatatgggcctcaagcaaagcaga
caacctgctgagtttttttgcaagacgcttacagctagtgacactagcactcatggtggc
ttttcagtgcctcgtcgagcagctgagaagatcttccctcctttggatttttcgatgcaa
ccacccgctcaagagctagtagctagagatttacatgagaatccatggacatttagacat
atctatcgaggtcaaccaaagaggcatcttctaactactggttggagtgtctttgttagc
aacaaaagactttttgctggtgattccgttcttttcataagagacgagaagtcacagttt
ctcttaggtataaggcgggccaatagacagcagccagctctctcttcatcagtaatttct
agtgatagcatgcatatagggatccttgctgctgcagctcatgctgctgcaaataacagc
ccatttaccatattctacaatccaagggcaagcccttccgagtttgtggtacccttggcg
aagtataacaaagccatgtatacccaagtttctcttggaatgcggtttagaatgatgttt
gaaactgaggagtgcggagtacgtagatacatgggtacgattactggtatcagtgacctg
gatcctgtacgatggaagaattcacagtggcgcaatcttcaggtaggatgggatgaatct
actgctggtgagcgaccaacccgagtttcaatttgggacatcgagcctgttgtaactcct
ttctacatatgcccaccaccgtttttcaggcctagattccccaagcaaccgggaatgcca
gataatgataatgatgttgagaatgcttttaagagagctatgccttggcttggagatgac
tttggcatgaaagattcccccaattcaatcttccctggtttgagtttagttcagtggatg
aacatgcaacaaaataatcagtttgcagctgctcaatctggactctttccttcaatggtt
tcttcgaatccgttgcacaatagccttggcactgatgatccatccaagttattgaatttt
caagctccggtgttacctgcgtcaaatatgcaatttaacaaagcaaatccaaaccaagtc
aaccagttgtctcaggcacctatgacctggccccagcaacagcaactccagcagttattg
cagactcctctgaatcaaaatccacaacagcagttacagcaacgacagtcacagctgcag
ccacagtcacatcttcaacagcagcctcagcctcagccacctctacagcagcagcagcag
caacaacaaagacaacaggcacagccacaaccacaaccacagcagcagcagccacctcta
cagcaactgcaacaacaacaaagacaacaggcacaaccgcagctgctgcaacaacaattt
ctaccagctcaagtaaataatggcatcactgcctcaaaccagatgccaaatcaaaatttg
catcagccaggtgtttattctcagattcagcaacagcagcaacaacaacaaatattgaca
agcaatggccagtcaactcaaaccacccttcctgctaataaggcttcatatcctttgaca
tcgttagctcaagatacacagattcagcaacaggtggaacagcaacctaacctcgtacag
agccaacagcaacagacacagttgcagcaaaatctgtcccagaggtcacaacagcagcca
caaattcaacaactggcacagcagggcctctcagagcaacaattccaattattacagaaa
ttgcagcaacagcagcagtcgtctcaacaattactctcacctactggatcactgtcgcag
tctccagtggtgcaacaacagccaatgcatcaacaaaaccaaccaatgcagcaggtgcct
ctttctcagagccaacagacacttggcagcaatggtttctcaacatcaatgctaatgcaa
ccacaacagctagtggtgagccaatcccaaaatcagaacaagccacttatggcaatgaga
acccattctggtcttactgatggagatgctccatcatgttcaacctcaccttctaccaat
aattgtcaggtttcaccatcaagcttcctaagcagaagtcagcaagtaccatccatggta
gtgacagatccagttgttgagcctgcaagtacactggttcaggagcttcagagcaagcct
gatatccgaatcaaacacgagttgcttgcctctaaaggtccagatcaatcaaagtacaaa
agtactgtgacagaccagttagaagcatcctcttctggaacatcatactgcctggatgca
ggcaccatccagcataatttctctctccccacctttttggaaggtgatgtccaatcacat
cctcggaacaatcttcaattttcagctaatattgacggactggcacccgacaccttgtta
tcaaggggatatgactctcaaaaggatcttcaaaacctgctttctaattatggtagcaat
ccaagagatattgacacagagttgtctactgctgcaataagtccccagtcatttggtgtg
ccaaacatacctttcaagagtgggtgttcaaatgatgttgccataaacgatgcaggagtt
ttaaatggtggattgtgggccaaccaaactcaacggatgcgaacatatacaaaggtgcaa
aagcgtggctctgtgggaagatcaatcgatgtgacccgctgcaaagggtatgatgaactc
aggcatgatctagcccgcatgtttggtatcgagggacagatggaagatccacaaagttct
gactggaaattagtatatgttgaccatgaaaatgacatattacttgttggtgatgatcct
tgggaagaatttgtaagttgtgttcagagcattaaaattctgtcatcccttgaagtacaa
caaatgagcttggatggtgaccttggaaatgtgccagttcccaatcaggcttgtagtgag
atcgacagtggaaatgcatggagaggacattatgatgatacttcagctgcctcttttaac
agataa
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