Gossypium hirsutum (upland cotton): 107929924
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Entry
107929924 CDS
T04793
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107929924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107929924
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
107929924
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
107929924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
107929924
NCBI-ProteinID:
XP_016716951
UniProt:
A0A1U8LQV1
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All DBs
Position
A07:2766974..2773203
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AA seq
686 aa
AA seq
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METQSPNGSLQKQSLPPKNYGITKPISLAGPSEADIQRNTELEKFLIESGLYESKEEAAK
REEVLGHISEIVKSWVKQLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVG
PSYVNREEDFFIILHDILAEKEEVTELQPVPDAHVPVMRFKFQGISIDLLYASISLLVVP
DDLDISRESVLHNVDEQTVRSLNGCRVADQILKLVPNVEHFRMTLRCLKFWAKRRGLYSN
VTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPV
WDPRKNPRDRFHHMPIITPAYPCMNSSYNVSLSTLRVMMEQFQFGNRICEEIDLNKAQWS
ALFEPHLFFEAYKNYLQVDIVSADADDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYP
NEYVDTSKQFPHCAFFMGLQRKEGVSGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYV
SHVRRRQLPAFVFPDGYRRPRSLRHPSQQTGKTCEDVTRSRSGSTERQIKRKRDDETVDE
KLNKPEKRASISPLRMESVSPDIITSKSGGTSHNSNGQAVKVEHRGTGDLDSLRGQTSLD
VDDSSVVRSVESAEQIGLPFRQELLSPCEVSDFETREACKAGLNQEKTADSTSAFINDPE
IGSSRRILNWKGVGAEVDREVVKACN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggagactcagagccctaacggatctttgcagaaacaatcactgcctccgaagaattat
ggaatcacgaaaccaatatcactcgcggggcctagtgaggctgatattcagcggaatacg
gaattagagaagtttctgatagagtcggggctttacgagagcaaagaggaggctgcgaaa
agagaggaggttcttggccatatctctgagattgtaaaaagttgggtaaagcaattaact
cgtcaaagaggctacactgatcagatggtggaggaagcaaatgctgtcattttcactttt
ggatcataccgtttaggggtgcatggacctggggctgacatagacactttgtgtgttggg
ccatcttatgtgaaccgagaggaagatttcttcatcattttgcatgatattttggctgag
aaggaagaagtcactgaacttcaacctgttccagatgctcatgtcccagtaatgaggttc
aagttccaagggatatctattgatcttctttatgcaagtatatctcttttggtcgttcca
gatgaccttgacatctcacgtgaatccgtgctgcataatgttgatgagcaaactgttcga
agtcttaatgggtgcagggttgctgatcaaatccttaaacttgtcccaaatgtcgagcac
ttccgcatgacacttagatgtttgaagttctgggcaaagaggcgtggactttattctaat
gttactggattcctaggaggtgtaaattgggctcttctagttgctcgtgtgtgccaactt
tatcccaatgcagtacctagcatgctggtttctcgatttttcagagtgtatactcaatgg
aggtggccaaaccctgttatgttgtgttcaattgaagaggatgaacttggctttccagtc
tgggatccgcgcaagaatcctcgggaccgtttccatcatatgccaataattactcctgca
tatccttgcatgaattccagttacaatgtctctttaagtacacttcgtgttatgatggaa
cagttccaatttggtaatagaatatgtgaggagattgatctaaacaaagctcaatggagt
gctttgtttgagcctcatcttttctttgaggcatacaaaaactatctacaagttgacata
gtttcggcagatgctgatgacttactggcatggaaaggctgggtagagtctcggcttaga
cagctaaccttgaagatagagcgggacacaaatggaatgttgcagtgtcacccttaccca
aacgagtatgttgatacatccaagcagttcccacattgtgcttttttcatgggtttgcag
aggaaagagggagtgagtggtctagaaggtcaacaatttgacatacgtggaacagttgat
gagttcagacaagagataagcatgtacatgtactggaaaccaggaatggatatttatgtt
tctcatgttcgtaggaggcagctcccagcgtttgttttccctgatggatatagacggcct
cgatcattgaggcatccaagccagcagactggaaaaacttgtgaagatgtcacgaggtcc
cgctcaggctctacggaaagacaaattaagagaaaacgtgatgatgagacagttgatgaa
aaattgaacaagcctgagaagcgagcctcaattagccccctgagaatggagtcggtttct
ccagatattattacaagcaagtctggtggaacatctcataatagcaatggtcaagcagtt
aaagtagagcatcgaggaactggggatcttgatagcttacgagggcagacttctttagac
gtagatgattcatcagtagttagaagtgtagagtcagctgagcagataggcttaccgttt
aggcaggagttgctttctccatgtgaagtttctgattttgaaacaagagaagcatgcaag
gctggcttgaatcaagagaaaactgcagattcgacatcagctttcatcaatgatcctgaa
attggatcttctaggagaattttgaactggaaaggagtgggtgccgaggtcgatcgagag
gtggtcaaagcatgtaattaa
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