Gossypium hirsutum (upland cotton): 107929926
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Entry
107929926 CDS
T04793
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107929926
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
Other 90S particles
107929926
Pre-60S particles
Other pre-60S particles
107929926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
TOR1L1_N
Hemerythrin
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
107929926
NCBI-ProteinID:
XP_016716959
UniProt:
A0A1U8LUQ3
LinkDB
All DBs
Position
A07:complement(1854447..1860973)
Genome browser
AA seq
1264 aa
AA seq
DB search
MEALDFFPDSPTGDFCDSVLRHFSNSDQEDSQRLCATVGAMTQELKEQNLPLSPIAYFGA
TCSSLDRLGSEPDSPPHIVQSLATVLSLLLPRIPVAVLKKKGDFVSRMVVTVLRLNSVTE
VTLTSGLKCLAQLLIAGDKVNWSDLSQNYGVLIGYLTDSRSKVRRQSHLCIRDVLQSLRG
TPVLAPASEAISNLFERFLLLAGGSNANSSEAVKGAQEVLYVLDALKDSLPLLSMKYMTT
ILKYYKTLLELRQPLVTRRVTDSLNVVCTYPNIEVSAEALLDLLSFLAVSVSASETSPVS
LTFNARLLSSGMMKVQSLNRQLCVIKLPIVFSALKDILGSEHEEAIFSATEAFKTLIDGC
IDEGLIKQGVDQIIHAQSDDRKSGPTIIEKVCAIIESLLDYHYSVAWDMAFQVVSTMFDK
LGYYSSYFMKGTIKNLADMQSLPDEDFPYRKQLHECVGSALGAMGPETFLGILPLNFQAN
DLSEVNVWLFPILKQHIVGARLGFFCETLLGLVEEMKQRSRRLGLEGKVFSSRSADALAY
SVWSLLPSFCNYPLDTAKSFKDLLKPICSALDEEHDIRGIICSSLQILIQQNKGIKEGKD
DADSSEICPAKQRAISHYTPEIAGENLNVLTASAPQLLKLLSGIFMKSTVDEGGSLQSTI
GEFASIAHKNIVRTIFKNTMERLLEVTQQAGVAEASNMQVDNSSSKSSLSLKRARLIDLA
VSLLPGLDEPALNLLFIAIKPALQDVDGLIQKKAYKVLSIVLRNQKGFLSAKLEELLKLM
IEVLPSLHFSAKRHRLDCLYELITHASKVDPNLRRHEILSSFLTEIILALKEANKKTRNR
AYEVLVQIGHEYGDQDDGGQREHLFNMVARGLAGETPHMISAAVKGLARLAYEFSDLVSS
AYKLLPSTYLLLQRKNREIIKANLGLLKVLVAKSQAEGLQAHLASLVEGLLKWQDDTKNH
FKAKVKLLVEMLVRKCGIDAVKAVMPEEHMKLLTNIRKIKERKEKKQAVSSGESKSHLSK
ATTSRLSRWNHTKIFSDFGDDNTDDSDVEMASGQKSKASSKLKSKASTLRSKKTRRAEKS
LPEDLLDQLEDEPLDLLDRHKTRSALRSSSNLKRKQDSDDEPEFDPEGRLIINEGRKPKK
VAVSDPDSDRRSEVPSHFSVGSSRNNQKRRKTSESGWAYTGSEYASKKAGGDVKRKDKLE
PYAYWPLDRKMMSRRPEHRAAARKGMASVVKMTKKLEGKSASTALSSKFMKLRKIQKKGG
KRKR
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttggacttcttcccggactcacccaccggtgatttctgcgactcagtactc
cgccacttctcgaactccgaccaagaagacagccaacggctctgcgccaccgttggcgca
atgactcaagaactgaaggaacaaaatctgcctctctcaccgatcgcctacttcggcgcc
acgtgttcttctctcgaccgcctaggctccgaaccggactcccctcctcacatcgtccag
tctctcgccaccgtcctctctctccttctcccccgtatccccgtcgccgttttgaaaaag
aaaggagatttcgtttcgaggatggtcgttacggtattgagattgaattccgttacggag
gtcacgctgacgtcaggtttgaaatgtttagctcagttattgattgctggagataaagtt
aattggtctgatttatcgcaaaattacggggttctaatcggatacttaaccgattcccgc
tctaaggtgagaaggcaatcgcatttgtgtatccgtgatgttttacaaagcttgagaggg
acaccggtgctggcacctgcgagtgaagctatatcaaacttattcgagaggtttcttctg
ctggccggcggttcaaatgcgaattcgagtgaagcggttaaaggagctcaggaagttctc
tatgttttggatgctcttaaggactctcttccacttttgtcgatgaaatacatgactaca
attcttaaatattataaaactttattggaacttcggcaacctcttgttactaggcgtgta
actgatagtttgaatgtggtttgtacttatccgaacatagaggtttcggctgaggcattg
ctggatttgttatcgtttttggctgtatctgtctctgcaagtgaaacttctccagttagc
ctgacgtttaatgctcgtttgttgagttctggaatgatgaaagtgcagtctcttaacagg
caactttgtgtgattaaactccccattgtgttcagtgcactcaaagatattctggggtcg
gaacatgaagaggctattttttctgctacggaggctttcaagaccctgatagacggctgc
attgatgagggtttgatcaaacagggagtggatcagattattcatgcacaatctgatgat
agaaagtcagggccaactataattgagaaagtttgtgcaatcattgagagcttacttgat
tatcattatagtgtggcgtgggatatggcatttcaagttgtttcaaccatgtttgataaa
ctagggtattactcttcatattttatgaagggtactattaagaacttggctgacatgcaa
agcttgccagatgaagattttccttacagaaaacagttacatgaatgtgttggatctgct
ctaggtgcaatggggcctgagacatttttaggaattttgccgctgaattttcaggctaat
gacctttcagaagtaaatgtgtggctgttcccaattctgaagcagcatattgtaggtgca
cgtttgggcttcttttgtgagacacttttgggtctggttgaagaaatgaagcagagatct
cggaggcttggactagaaggaaaggttttctcatcaagaagtgcagatgctcttgcatac
tcagtgtggtccttgttgccgtctttttgtaattatcctttggatactgccaaaagcttc
aaggatcttctaaagccaatatgcagtgcccttgatgaagaacatgatattcgtggaata
atatgctctagtttgcagattctgattcaacaaaataagggaattaaggaaggaaaagat
gatgctgacagttctgaaatatgtcctgccaaacagcgagcgatatctcattatacccca
gagatcgctggggaaaatttaaatgtgctaactgcatctgctccacagttattgaaactt
ttgtcaggaatcttcatgaaatctacagtagatgagggtggttctttgcagtccacgatt
ggggagtttgcttccatagcacataagaacattgtcagaaccatatttaaaaacacgatg
gaaaggcttttagaagtcacgcaacaggctggggtagctgaggcatcaaatatgcaggtc
gataattcatcatctaaaagctcattatctctcaaaagggcacggttaattgacctggca
gtgtcacttttgcctggtttagatgagccagcattaaatctcttattcattgcaataaaa
cctgcattgcaggatgtggatggcttgattcagaagaaagcgtacaaagttctttcaata
gttctcaggaaccaaaaaggatttctatctgccaaactggaggaattgcttaaacttatg
attgaagtattgccatcattgcacttttctgccaaacgtcacagactcgactgtttgtat
gagctgataacccatgcctctaaggtggatccgaacctgaggagacatgagattcttagt
tctttcctgactgagataatccttgctttgaaagaggctaataagaaaactagaaataga
gcttatgaggtccttgtccaaattggccatgaatatggagatcaagatgacggtggacag
agagaacatctgtttaatatggttgctagaggtttggctggagaaactcctcatatgatt
agtgctgctgtgaaaggcttggctcggttggcttatgagttctctgatcttgtttcttct
gcttacaagttgcttccttccacatatcttctccttcaaagaaagaacagagaaattatt
aaagctaatttgggtttgttgaaagtgttggtggccaaatcacaagctgaaggcttgcaa
gcacacctggccagcttggtggaaggcttgttgaagtggcaagatgataccaaaaatcat
tttaaagctaaggttaagcttcttgtggaaatgctagttaggaaatgtggtatcgatgct
gtgaaggctgtgatgcctgaagaacacatgaagctccttactaacatacgaaagatcaag
gagaggaaagagaagaaacaggctgttagctctggggaaagtaaatctcatctgtcaaag
gcaacaacttccaggcttagcagatggaatcatacgaaaatattctctgattttggtgat
gacaatacagatgacagtgatgtggagatggcttctggccaaaagagcaaagcttcctca
aagttgaaatcaaaagcatctacacttcggtccaagaaaacccggagagcagagaagagc
ttgcctgaggacttgcttgaccagttagaagacgagccactggacttgcttgatcggcat
aaaacaagatccgcacttcgatcatcttcaaatctcaagcggaagcaagattccgacgat
gaaccagagttcgaccctgagggacgcttgataattaacgagggaaggaagccaaagaag
gttgctgtatcagacccggattcagatagaagaagtgaagtgccaagtcatttctcggtt
ggctcttcaagaaacaaccagaagagaaggaaaacatcagagtctggatgggcatacacg
ggaagcgagtatgctagcaagaaggctggtggggatgtaaagaggaaggataaactcgaa
ccatacgcatattggccccttgatcgtaagatgatgagccgtaggccggaacatcgggca
gctgcaaggaaaggcatggcaagtgtggtgaaaatgacaaaaaagcttgaaggtaagagt
gcctcaactgcactctcttctaaattcatgaagttaaggaagattcaaaagaaaggtggc
aagcgaaaaaggtga
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