Gossypium hirsutum (upland cotton): 107929935
Help
Entry
107929935 CDS
T04793
Name
(RefSeq) oligouridylate-binding protein 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107929935
03041 Spliceosome [BR:
ghi03041
]
107929935
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107929935
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107929935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
107929935
NCBI-ProteinID:
XP_016716970
UniProt:
A0A1U8LQZ6
LinkDB
All DBs
Position
A07:1805783..1809485
Genome browser
AA seq
396 aa
AA seq
DB search
MQQQGLNPQQQAMMQQALYHHPSLFAGPQIEPILSGNLPPNFDSATCRSVYVGNIHPQVS
EPLLQEVFLSTGPIEGCKLIKKDKSSYGFVHYFDRRSAALAIVTLNGRHLFGQPIKVNWA
YASSQREDTSTHHNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVS
FRNQQDAQSAINDLNGKWLGSRQIRCNWAAKGATSNDDNAKSIVDSNGPSEEGQEKSNDD
SPENNPMYTTVYVGNLAPEVTSADLHSHFHALGAGTIEDVRVQRDKGFGFVRYSSHDEAA
LAIQMGNARILCSKPIKCSWGSKPTALGTSSGPLPPPTAAHMAGGAQVMNMMHPQGQYAV
KAQAAMGMSSGEASQAMYNGGYQNVATSQQQLMYYQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacaagggctaaatccccaacagcaagctatgatgcaacaagctttataccat
catcctagtctcttcgctggtcctcagatagagcctatcttgagtggaaatcttcctcct
aactttgattcagctacttgccgcagtgtgtacgtcggaaatattcatccacaggtatcg
gaaccgcttctacaagaagttttcttgagtactggtcctattgaaggttgcaaacttatt
aaaaaggataagtcatcctatggtttcgtgcactactttgatcgcagatcagctgcactt
gctattgtgactcttaacggaaggcatctatttgggcaacctattaaagttaattgggca
tatgctagcagtcagagggaggacacgtcgactcatcacaacatttttgtcggtgatctc
agccccgaagttacagatgctacattatttgcttgcttttctgtgtattccagttgttcg
gatgcaagggtcatgtgggatcaaaaaaccgggcgctcaagaggttttggttttgtttct
tttaggaaccagcaggatgcccaaagtgcaataaatgacttaaatgggaagtggctcgga
agtagacagatccgatgtaactgggctgcaaaaggtgctacttccaatgatgacaatgcc
aaaagtattgtggactcaaatggaccttctgaagaaggtcaagaaaaatctaatgacgat
tctccggagaacaatcctatgtataccactgtttatgtgggcaacctcgctccagaggtt
acatcagctgatctccacagtcatttccatgctctcggagcaggaactattgaagatgtc
cgtgtccaacgagacaaaggttttggttttgtgaggtacagttcacacgatgaagctgct
cttgccattcagatgggaaatgctcgaattctttgcagtaaaccaatcaagtgctcatgg
ggtagcaaaccaaccgcactgggaacaagctctggtcctcttcctccaccaacagctgca
catatggctggtggtgctcaagtaatgaacatgatgcatccacaaggtcagtatgccgtt
aaggcacaggcagccatgggaatgagtagtggtgaagctagtcaggcgatgtacaatggc
ggataccaaaacgttgcgacatcccagcagcagcttatgtattaccagtaa
DBGET
integrated database retrieval system
