Gossypium hirsutum (upland cotton): 107930042
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Entry
107930042 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107930042 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107930042
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107930042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
107930042
NCBI-ProteinID:
XP_016717086
UniProt:
A0A1U8LR82
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Position
D08:complement(60047643..60052409)
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AA seq
386 aa
AA seq
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MSSDTARENASVVDSSVTEWKNDMGNSDDLENEDGYPFKAQDLEHSHVADKRGKLCNKRY
FIIKSLNHQNIQLSIDKGIWATQVMNEPILEDAFHNSGCVILIFSVNMSGFFQGYAQMMS
SVGWRRDNVWSQGSGKGNPWGRSFKVKWLCLNHLPFQKTLHLKNPLNDYKPVKISRDCQE
LPQDIGEALCELLDVSNDVDVLLKRDDLASKRPCLEPPYSLGDQDYSVPPLHVPWPGTPM
PYNPFLYQHQADPNRFHLTHPHTLATEYFPTSMGASKVASMKNSRINRNLTNLQINHDMS
TQFDAWGLCAESPLASTLTEDDFLEMTYEEYLEAHGRTSKQLCRPVSVMIPSPTVQESTS
GKHGDDSNSSLVTDRRHSRKRTHNSS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatactgcaagagaaaatgcatctgtagttgattcatcggtgactgaatgg
aaaaatgacatgggaaattcagatgatttagagaatgaggatggctatccctttaaggca
caagacctagagcattctcatgtggcagacaaaaggggcaaattgtgtaataaaagatat
ttcatcattaagagtttgaaccaccaaaatattcaactatcaattgacaaaggaatttgg
gctactcaagtcatgaatgaaccaattctagaagatgcttttcataattccggttgtgtt
attttaatatttagtgtcaacatgagtggtttcttccaaggttatgcccaaatgatgtct
tctgttggatggaggcgagataatgtttggagccaaggaagtggtaaaggtaatccttgg
ggccgcagttttaaggtcaaatggctctgcttgaatcacctgcctttccaaaagactcta
caccttaagaaccctttgaatgactacaaacctgtcaaaatcagcagggactgccaggaa
ttacctcaagatataggggaagctctttgtgagctccttgatgtgagtaatgatgtggat
gttttgctgaaaagggatgatctagcttcaaagaggccttgcctagaacctccatattct
ttaggagatcaagattatagtgtgcctccgctgcatgtgccttggcctggtacacccatg
ccttacaatcccttcctctatcaacatcaggctgacccaaatagattccatttaacacat
ccgcatactttggctactgagtattttcctaccagtatgggagcatcaaaggttgcaagt
atgaaaaattctcgcatcaacagaaatctcaccaatctacaaataaaccatgatatgtct
actcaatttgatgcttggggtttatgtgcagaaagcccacttgctagtaccttgactgag
gatgatttccttgaaatgacatatgaagagtacctagaagcccatggcagaaccagcaaa
caactatgccgccctgtcagtgtgatgataccatctccgacagtacaagagtcaacaagt
ggaaagcatggagatgattcaaactcaagtttggtaaccgaccggcgccattctcgtaag
aggacacataactcgtcctag
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