Gossypium hirsutum (upland cotton): 107930254
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Entry
107930254 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107930254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107930254
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107930254
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RSRP
RRM_occluded
RRM_3
Transformer
Motif
Other DBs
NCBI-GeneID:
107930254
NCBI-ProteinID:
XP_016717339
UniProt:
A0A1U8LRZ4
LinkDB
All DBs
Position
A09:79018304..79022898
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AA seq
253 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFDNSRDAED
AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGGAAKFGVSRHSEYRVIVRGLPSS
ASWQDLKDHMRKAGDVCFAEISRDSDGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAY
IRVKRYESSPSRSRSRSRSVRRDRSRSRERSASKSPVKSRSASPVKSPRARSRSKSRSRS
RSGSPEKAQPVSD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgcttctctcgcacaatctatgttggcaacctaccctctgatatcagagaa
tgggaggtcgaagatctattctacaagtatggtcgtattttggatatcgaattgaagatc
ccgccacgccctccatgttattgttttgttgagtttgacaattcaagggatgctgaagat
gcaattaggggtcgagatggttacaactttgatggttgtcgtttgagggttgagcttgct
catggtggcagaggacaatcctcaagtgatcgtcggggtggatatggagggggtgcagct
aaatttggcgtctcacgacattctgaatatcgagttattgtccgtgggctcccctcttct
gcttcctggcaagatttgaaggatcacatgcgaaaagctggtgatgtgtgttttgccgaa
atttcgcgtgacagtgatggaacttttggtattgttgattataccaattatgatgacatg
aaatatgccatccgcaaacttgatgacaccgagtttagaaatccttgggcaagggcttat
attcgggtgaagagatatgagagcagtccatccaggagccgaagtagaagccgcagcgtt
agaagagatcggagtagatcaagggaacggtctgcatccaaatctccagttaaatccaga
tctgcctcccctgtgaagtcacccagagcaagatcgagatcaaagtcaaggtcaaggtca
aggtcaggatctcctgaaaaggcccaaccggttagcgactga
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